RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
RPE-210ENST00000438204 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
RPE-210ENST00000438204 ATAD5Q96QE3 1844 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 PI4KAP2A4QPH2 592 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 DDX58O95786 925 aaKnown RBP11.7□□□□□ -0.54
RPE-210ENST00000438204 CSF1RP07333 972 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 CYP2B6P20813 491 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 CCND3P30281 292 aaPredicted RBP11.7□□□□□ -0.54
RPE-210ENST00000438204 CASP7P55210 303 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 TCP10Q12799 353 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 APOBEC3HQ6NTF7 200 aaKnown RBP11.7□□□□□ -0.54
RPE-210ENST00000438204 PI4KAP1Q8N8J0 262 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 HCN4Q9Y3Q4 1203 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 ZHX2Q9Y6X8 837 aa11.7□□□□□ -0.54
RPE-210ENST00000438204 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 RTP1P59025 263 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 FKBP1CQ5VVH2 108 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 LHX8Q68G74 356 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
RPE-210ENST00000438204 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
RPE-210ENST00000438204 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
RPE-210ENST00000438204 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 ASB2Q96Q27 587 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
RPE-210ENST00000438204 SLC45A1Q9Y2W3 748 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
RPE-210ENST00000438204 PLXNA1Q9UIW2 1896 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 HIBADHP31937 336 aaKnown RBP11.68□□□□□ -0.54
RPE-210ENST00000438204 NFIAQ12857 509 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
RPE-210ENST00000438204 KSR2Q6VAB6 950 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 SCYL3Q8IZE3 742 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 BADQ92934 168 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
RPE-210ENST00000438204 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
RPE-210ENST00000438204 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 REV3LO60673 3130 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 PEX10O60683 326 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 PTPRAP18433 802 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
RPE-210ENST00000438204 CACNB2Q08289 660 aaPredicted RBP11.67□□□□□ -0.54
RPE-210ENST00000438204 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 ATXN2LQ8WWM7 1075 aaKnown RBP11.67□□□□□ -0.54
RPE-210ENST00000438204 FAM84BQ96KN1 310 aaPredicted RBP11.67□□□□□ -0.54
RPE-210ENST00000438204 C1QTNF1Q9BXJ1 281 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 ATP11BQ9Y2G3 1177 aa11.67□□□□□ -0.54
RPE-210ENST00000438204 ZKSCAN1P17029 563 aaPredicted RBP11.66□□□□□ -0.54
RPE-210ENST00000438204 GCKRQ14397 625 aa11.66□□□□□ -0.54
RPE-210ENST00000438204 CCL14Q16627 93 aa11.66□□□□□ -0.54
RPE-210ENST00000438204 PICK1Q9NRD5 415 aa11.66□□□□□ -0.54
RPE-210ENST00000438204 CACNA1AO00555 2505 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 PHF20L1A8MW92 1017 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 DNAJB2P25686 324 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 IFIT5Q13325 482 aaKnown RBP11.65□□□□□ -0.54
RPE-210ENST00000438204 CCDC85BQ15834 202 aaPredicted RBP11.65□□□□□ -0.54
RPE-210ENST00000438204 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 RNPC3Q96LT9 517 aaKnown RBP11.65□□□□□ -0.54
RPE-210ENST00000438204 EPHX3Q9H6B9 360 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 GBF1Q92538 1859 aa11.65□□□□□ -0.54
RPE-210ENST00000438204 EPHB4P54760 987 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 MRPS5P82675 430 aaKnown RBP11.64□□□□□ -0.55
RPE-210ENST00000438204 FOXO4P98177 505 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 PDE3AQ14432 1141 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 G2E3Q7L622 706 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
RPE-210ENST00000438204 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
RPE-210ENST00000438204 MYH2Q9UKX2 1941 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 TAF7LQ5H9L4 462 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 CDC42EP5Q6NZY7 148 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 ZNF576Q9H609 170 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 PDLIM7Q9NR12 457 aa11.63□□□□□ -0.55
RPE-210ENST00000438204 FAM86C2PA6NEL3 165 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 ZNF853P0CG23 659 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 UBE4AQ14139 1066 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 TRIM60Q495X7 471 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 GAS2L1Q99501 681 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms