RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CYB5R4Q7L1T6 521 aa18.02■□□□□ 0.47
SGCE-205ENST00000437425 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.47
SGCE-205ENST00000437425 AATFQ9NY61 560 aaKnown RBP eCLIP18.02■□□□□ 0.47
SGCE-205ENST00000437425 ZSWIM5Q9P217 1185 aa18.02■□□□□ 0.47
SGCE-205ENST00000437425 MROH7-TTC4A0A0A0MT08 1334 aa18.01■□□□□ 0.47
SGCE-205ENST00000437425 MINDY4BA8MYZ0 360 aa18.01■□□□□ 0.47
SGCE-205ENST00000437425 IFIT3O14879 490 aaKnown RBP18.01■□□□□ 0.47
SGCE-205ENST00000437425 KDM4AO75164 1064 aa18.01■□□□□ 0.47
SGCE-205ENST00000437425 MSL1Q68DK7 614 aa18.01■□□□□ 0.47
SGCE-205ENST00000437425 NID2Q14112 1375 aa18■□□□□ 0.47
SGCE-205ENST00000437425 CCDC69A6NI79 296 aa18■□□□□ 0.47
SGCE-205ENST00000437425 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
SGCE-205ENST00000437425 NFXL1Q6ZNB6 911 aa18■□□□□ 0.47
SGCE-205ENST00000437425 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
SGCE-205ENST00000437425 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
SGCE-205ENST00000437425 DCP1AQ9NPI6 582 aaPredicted RBP18■□□□□ 0.47
SGCE-205ENST00000437425 BRPF3Q9ULD4 1205 aa18■□□□□ 0.47
SGCE-205ENST00000437425 COL11A2P13942 1736 aaPredicted RBP18■□□□□ 0.47
SGCE-205ENST00000437425 CCDC196A0A1B0GTZ2 297 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 ZBTB43O43298 467 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 ORC4O43929 436 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 JAK2O60674 1132 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 METAP2P50579 478 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCE-205ENST00000437425 PDE4BQ07343 736 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 WTAPQ15007 396 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 ATL3Q6DD88 541 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 CTR9Q6PD62 1173 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 APOA5Q6Q788 366 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 IQCA1Q86XH1 822 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 LY9Q9HBG7 655 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 TOMM22Q9NS69 142 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 HPS5Q9UPZ3 1129 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
SGCE-205ENST00000437425 GPR75-ASB3A0A0A6YYF3 556 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 G3V3G9 751 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 CTDNEP1O95476 244 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 KRT85P78386 507 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 PODNQ7Z5L7 613 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 SYAP1Q96A49 352 aaPredicted RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 ZNF287Q9HBT7 754 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 USP17L12C9JPN9 530 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 USP17L21D6R901 530 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 USP5P45974 858 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 CCDC178Q5BJE1 867 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 L1TD1Q5T7N2 865 aaKnown RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
SGCE-205ENST00000437425 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 SCAND2PQ9GZW5 306 aaPredicted RBP17.98■□□□□ 0.47
SGCE-205ENST00000437425 GAKO14976 1311 aa17.97■□□□□ 0.47
SGCE-205ENST00000437425 CDC37L1Q7L3B6 337 aa17.97■□□□□ 0.47
SGCE-205ENST00000437425 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
SGCE-205ENST00000437425 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
SGCE-205ENST00000437425 NCOA5Q9HCD5 579 aaKnown RBP17.97■□□□□ 0.47
SGCE-205ENST00000437425 UBE2HP62256 183 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 WASF1Q92558 559 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
SGCE-205ENST00000437425 CFAP45Q9UL16 551 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 JAG2Q9Y219 1238 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 ELP1O95163 1332 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 LAMB1P07942 1786 aa17.96■□□□□ 0.47
SGCE-205ENST00000437425 GOLGA8AA7E2F4 631 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 CALM1P0DP23 149 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 CALM2P0DP24 149 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 CALM3P0DP25 149 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 ORC3Q9UBD5 711 aaPredicted RBP17.95■□□□□ 0.46
SGCE-205ENST00000437425 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
SGCE-205ENST00000437425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
SGCE-205ENST00000437425 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
SGCE-205ENST00000437425 GTF2IP78347 998 aa17.94■□□□□ 0.46
SGCE-205ENST00000437425 C12orf60Q5U649 245 aa17.94■□□□□ 0.46
SGCE-205ENST00000437425 DEFB132Q7Z7B7 95 aa17.94■□□□□ 0.46
SGCE-205ENST00000437425 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
SGCE-205ENST00000437425 C10orf71Q711Q0 1435 aa17.94■□□□□ 0.46
SGCE-205ENST00000437425 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 BTDP43251 543 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 MRIQ9BWK5 157 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 GZF1Q9H116 711 aaPredicted RBP17.93■□□□□ 0.46
SGCE-205ENST00000437425 TACC3Q9Y6A5 838 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 GOLGA6L3A6NEY3 463 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 RANBP6O60518 1105 aaKnown RBP17.93■□□□□ 0.46
SGCE-205ENST00000437425 DNM1Q05193 864 aaKnown RBP17.93■□□□□ 0.46
SGCE-205ENST00000437425 RESTQ13127 1097 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 SEC23AQ15436 765 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 DIXDC1Q155Q3 683 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 SLC51AQ86UW1 340 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 SH3RF3Q8TEJ3 882 aaPredicted RBP17.93■□□□□ 0.46
SGCE-205ENST00000437425 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 INCENPQ9NQS7 918 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 CNPY2Q9Y2B0 182 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 MYH2Q9UKX2 1941 aa17.93■□□□□ 0.46
SGCE-205ENST00000437425 TNKSO95271 1327 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms