RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 BABAM1Q9NWV8 329 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 MKI67P46013 3256 aaKnown RBP11.01□□□□□ -0.65
NIF3L1-208ENST00000436412 WIPF1O43516 503 aa11□□□□□ -0.65
NIF3L1-208ENST00000436412 NEUROD2Q15784 382 aa11□□□□□ -0.65
NIF3L1-208ENST00000436412 DLK2Q6UY11 383 aa11□□□□□ -0.65
NIF3L1-208ENST00000436412 ARHGAP9Q9BRR9 750 aa11□□□□□ -0.65
NIF3L1-208ENST00000436412 NXF1Q9UBU9 619 aaKnown RBP11□□□□□ -0.65
NIF3L1-208ENST00000436412 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
NIF3L1-208ENST00000436412 LAMB2P55268 1798 aa11□□□□□ -0.65
NIF3L1-208ENST00000436412 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 LRRC37AA6NMS7 1700 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 ADM5C9JUS6 153 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 SF3B3Q15393 1217 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 KIF4BQ2VIQ3 1234 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 GCC1Q96CN9 775 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 PLEKHF1Q96S99 279 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 DBNDD1Q9H9R9 158 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 TSPYL4Q9UJ04 414 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
NIF3L1-208ENST00000436412 ECE2O60344 883 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 EGFRP00533 1210 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 VIL1P09327 827 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 SCARF1Q14162 830 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 NOM1Q5C9Z4 860 aaKnown RBP10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 COPS6Q7L5N1 327 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 GGA3Q9NZ52 723 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 POLLQ9UGP5 575 aa10.98□□□□□ -0.65
NIF3L1-208ENST00000436412 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 SOBPA7XYQ1 873 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 ZNF280AP59817 542 aaPredicted RBP10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 RASAL3Q86YV0 1011 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 CCDC116Q8IYX3 515 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 AGBL3Q8NEM8 1001 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 IL27Q8NEV9 243 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 XAGE3Q8WTP9 111 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 CDCA5Q96FF9 252 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 HDAC9Q9UKV0 1011 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 RTL9Q8NET4 1388 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 TAF1P21675 1872 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 HTTP42858 3142 aa10.97□□□□□ -0.65
NIF3L1-208ENST00000436412 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 ZNF609O15014 1411 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 PITPNM2Q9BZ72 1349 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 ANXA1P04083 346 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 GPSM2P81274 684 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 CELF1Q92879 486 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.65
NIF3L1-208ENST00000436412 CENPFP49454 3210 aa10.96□□□□□ -0.66
NIF3L1-208ENST00000436412 HSP90B1P14625 803 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 RPS8P62241 208 aaKnown RBP10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 NPAS3Q8IXF0 933 aa10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 ZNF296Q8WUU4 475 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 KCTD15Q96SI1 283 aaPredicted RBP10.95□□□□□ -0.66
NIF3L1-208ENST00000436412 SCN9AQ15858 1988 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 H3BM21 787 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 TM4SF4P48230 202 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 C6orf118Q5T5N4 469 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 ANGEL2Q5VTE6 544 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 FBXO46Q6PJ61 603 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
NIF3L1-208ENST00000436412 ASTN2O75129 1339 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 GPR25O00155 361 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 PTK2Q05397 1052 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 SLC10A4Q96EP9 437 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 FAM89AQ96GI7 184 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 CFHR5Q9BXR6 569 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
NIF3L1-208ENST00000436412 IRS4O14654 1257 aaPredicted RBP10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 UFL1O94874 794 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 TBC1D8O95759 1140 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 HOXB7P09629 217 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 MMP14P50281 582 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 RIPK4P57078 832 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 SREBF2Q12772 1141 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 GMLQ99445 158 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
NIF3L1-208ENST00000436412 A0A0C4DFX4 3053 aa10.91□□□□□ -0.66
NIF3L1-208ENST00000436412 FKTNO75072 461 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms