RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 UBR3Q6ZT12 1888 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 CTBSQ01459 385 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 SFSWAPQ12872 951 aaKnown RBP13.5□□□□□ -0.25
LINC01090-202ENST00000434418 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
LINC01090-202ENST00000434418 GPR162Q16538 588 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 IER5Q5VY09 327 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
LINC01090-202ENST00000434418 CHD4Q14839 1912 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 LOC102724428A0A0B4J2F2 783 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 MX2P20592 715 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 IDH3AP50213 366 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 SIK1P57059 783 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 TRAIPQ9BWF2 469 aa13.49□□□□□ -0.25
LINC01090-202ENST00000434418 ABL1P00519 1130 aa13.48□□□□□ -0.25
LINC01090-202ENST00000434418 GRNP28799 593 aaKnown RBP13.48□□□□□ -0.25
LINC01090-202ENST00000434418 TREML1Q86YW5 311 aa13.48□□□□□ -0.25
LINC01090-202ENST00000434418 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
LINC01090-202ENST00000434418 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
LINC01090-202ENST00000434418 UTRNP46939 3433 aa13.48□□□□□ -0.25
LINC01090-202ENST00000434418 C2CD2LO14523 706 aa13.47□□□□□ -0.25
LINC01090-202ENST00000434418 ZBTB39O15060 712 aa13.47□□□□□ -0.25
LINC01090-202ENST00000434418 MICAL2O94851 1124 aa13.47□□□□□ -0.25
LINC01090-202ENST00000434418 ITPK1Q13572 414 aa13.47□□□□□ -0.25
LINC01090-202ENST00000434418 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-202ENST00000434418 USP20Q9Y2K6 914 aa13.47□□□□□ -0.25
LINC01090-202ENST00000434418 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
LINC01090-202ENST00000434418 BRD1O95696 1058 aa13.46□□□□□ -0.25
LINC01090-202ENST00000434418 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.25
LINC01090-202ENST00000434418 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
LINC01090-202ENST00000434418 STIM2Q9P246 746 aa13.46□□□□□ -0.25
LINC01090-202ENST00000434418 WIPF1O43516 503 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
LINC01090-202ENST00000434418 INPP5BP32019 993 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 MARK1Q9P0L2 795 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 KDRP35968 1356 aa13.45□□□□□ -0.26
LINC01090-202ENST00000434418 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01090-202ENST00000434418 MPSTP25325 297 aa13.44□□□□□ -0.26
LINC01090-202ENST00000434418 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
LINC01090-202ENST00000434418 PLEKHO1Q53GL0 409 aaPredicted RBP13.44□□□□□ -0.26
LINC01090-202ENST00000434418 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
LINC01090-202ENST00000434418 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
LINC01090-202ENST00000434418 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
LINC01090-202ENST00000434418 OPLAHO14841 1288 aa13.43□□□□□ -0.26
LINC01090-202ENST00000434418 BMP4P12644 408 aa13.43□□□□□ -0.26
LINC01090-202ENST00000434418 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
LINC01090-202ENST00000434418 IL13P35225 146 aa13.43□□□□□ -0.26
LINC01090-202ENST00000434418 COL5A3P25940 1745 aaPredicted RBP13.42□□□□□ -0.26
LINC01090-202ENST00000434418 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
LINC01090-202ENST00000434418 HMGB2P26583 209 aaKnown RBP13.42□□□□□ -0.26
LINC01090-202ENST00000434418 ARSDP51689 593 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 CABP4P57796 275 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
LINC01090-202ENST00000434418 ATCAYQ86WG3 371 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 SLC30A3Q99726 388 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 KCNH4Q9UQ05 1017 aa13.42□□□□□ -0.26
LINC01090-202ENST00000434418 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
LINC01090-202ENST00000434418 ZNF831Q5JPB2 1677 aa13.41□□□□□ -0.26
LINC01090-202ENST00000434418 MTHFSP49914 203 aa13.41□□□□□ -0.26
LINC01090-202ENST00000434418 SRSF11Q05519 484 aaKnown RBP13.41□□□□□ -0.26
LINC01090-202ENST00000434418 LAMC2Q13753 1193 aa13.41□□□□□ -0.26
LINC01090-202ENST00000434418 RAB44Q7Z6P3 723 aaPredicted RBP13.41□□□□□ -0.26
LINC01090-202ENST00000434418 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
LINC01090-202ENST00000434418 HMOX1P09601 288 aa13.4□□□□□ -0.26
LINC01090-202ENST00000434418 ZAP70P43403 619 aa13.4□□□□□ -0.26
LINC01090-202ENST00000434418 RGL4Q8IZJ4 473 aa13.4□□□□□ -0.26
LINC01090-202ENST00000434418 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
LINC01090-202ENST00000434418 H3BRB1 525 aa13.39□□□□□ -0.27
LINC01090-202ENST00000434418 TUT1Q9H6E5 874 aaKnown RBP13.39□□□□□ -0.27
LINC01090-202ENST00000434418 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
LINC01090-202ENST00000434418 TJP1Q07157 1748 aa13.39□□□□□ -0.27
LINC01090-202ENST00000434418 SPEM2Q0P670 501 aa13.38□□□□□ -0.27
LINC01090-202ENST00000434418 WHAMMQ8TF30 809 aa13.38□□□□□ -0.27
LINC01090-202ENST00000434418 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
LINC01090-202ENST00000434418 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
LINC01090-202ENST00000434418 MMP10P09238 476 aa13.37□□□□□ -0.27
LINC01090-202ENST00000434418 SLURP2P0DP57 97 aa13.37□□□□□ -0.27
LINC01090-202ENST00000434418 LORP23490 312 aaPredicted RBP13.37□□□□□ -0.27
LINC01090-202ENST00000434418 IVNS1ABPQ9Y6Y0 642 aa13.37□□□□□ -0.27
LINC01090-202ENST00000434418 CICQ96RK0 1608 aaPredicted RBP13.37□□□□□ -0.27
LINC01090-202ENST00000434418 MYH14Q7Z406 1995 aaKnown RBP13.37□□□□□ -0.27
LINC01090-202ENST00000434418 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
LINC01090-202ENST00000434418 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
LINC01090-202ENST00000434418 ICMTO60725 284 aa13.36□□□□□ -0.27
LINC01090-202ENST00000434418 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
LINC01090-202ENST00000434418 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC01090-202ENST00000434418 TRAPPC3LQ5T215 181 aa13.36□□□□□ -0.27
LINC01090-202ENST00000434418 GPR152Q8TDT2 470 aa13.36□□□□□ -0.27
LINC01090-202ENST00000434418 ACDQ96AP0 544 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms