RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 MIGA2Q7L4E1 593 aa16.11■□□□□ 0.17
TRAPPC4-202ENST00000434101 FOCADQ5VW36 1801 aa16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 ERO1BQ86YB8 467 aa16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-202ENST00000434101 SPDYE5A6NIY4 337 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 GJA5P36382 358 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 GTF2A2P52657 109 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 IFNL1Q8IU54 200 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZFPM1Q8IX07 1006 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 BCL11AQ9H165 835 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZNF112Q9UJU3 913 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 SNCAIPQ9Y6H5 919 aa16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-202ENST00000434101 PPP4CP60510 307 aa16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 CFHR5Q9BXR6 569 aa16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.16
TRAPPC4-202ENST00000434101 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 DDTLA6NHG4 134 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 TBC1D8O95759 1140 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 CYP7A1P22680 504 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 INPP5BP32019 993 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 PPIL2Q13356 520 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 NOL9Q5SY16 702 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 SH3RF3Q8TEJ3 882 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 DCTPP1Q9H773 170 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 MYH1P12882 1939 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 MYH7P12883 1935 aa16.07■□□□□ 0.16
TRAPPC4-202ENST00000434101 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 MAP3K10Q02779 954 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 PPATQ06203 517 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 MAGEB6Q8N7X4 407 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 MS4A4AQ96JQ5 239 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 ANTXR1Q9H6X2 564 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 NDUFB9Q9Y6M9 179 aa16.06■□□□□ 0.16
TRAPPC4-202ENST00000434101 CCL15-CCL14A0A0B4J2E2 113 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 GPR25O00155 361 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 TBC1D12O60347 775 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 CETPP11597 493 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 CCL15Q16663 113 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 ADGRA1Q86SQ6 560 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 DNAJC2Q99543 621 aaKnown RBP16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 DHX36Q9H2U1 1008 aaKnown RBP16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
TRAPPC4-202ENST00000434101 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 IRF6O14896 467 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 ATP5JP18859 108 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 DGKZQ13574 1117 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
TRAPPC4-202ENST00000434101 PHF20L1A8MW92 1017 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 GOLIM4O00461 696 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 SMARCA5O60264 1052 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 CTNND1O60716 968 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 AAMPQ13685 434 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 BRI3BPQ8WY22 251 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 PTPN18Q99952 460 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 BOLA2Q9H3K6 86 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
TRAPPC4-202ENST00000434101 PTPRFP10586 1907 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 FLT1P17948 1338 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 FKTNO75072 461 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 DYNLL1P63167 89 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 CTU1Q7Z7A3 348 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 ABHD8Q96I13 439 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 HAUS7Q99871 368 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 MCOLN1Q9GZU1 580 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.16
TRAPPC4-202ENST00000434101 SIPA1L1O43166 1804 aa16.01■□□□□ 0.15
TRAPPC4-202ENST00000434101 PHIPQ8WWQ0 1821 aa16.01■□□□□ 0.15
TRAPPC4-202ENST00000434101 CAPN15O75808 1086 aa16.01■□□□□ 0.15
TRAPPC4-202ENST00000434101 PDE6AP16499 860 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms