RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 BACH2Q9BYV9 841 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 KIAA0586Q9BVV6 1533 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
HDAC9-213ENST00000433709 F6X3S4 739 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 FURINP09958 794 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 ADH5P11766 374 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 LLGL2Q6P1M3 1020 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 FAM9AQ8IZU1 332 aaPredicted RBP9.08□□□□□ -0.96
HDAC9-213ENST00000433709 GPBAR1Q8TDU6 330 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 UTP4Q969X6 686 aaKnown RBP9.08□□□□□ -0.96
HDAC9-213ENST00000433709 KRT82Q9NSB4 513 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 PPP1R9AQ9ULJ8 1098 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 CARMIL1Q5VZK9 1371 aa9.08□□□□□ -0.96
HDAC9-213ENST00000433709 LIG3P49916 1009 aa9.07□□□□□ -0.96
HDAC9-213ENST00000433709 LRRC14Q15048 493 aa9.07□□□□□ -0.96
HDAC9-213ENST00000433709 RSPO4Q2I0M5 234 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-213ENST00000433709 NKAPLQ5M9Q1 402 aa9.07□□□□□ -0.96
HDAC9-213ENST00000433709 C2CD4AQ8NCU7 369 aaPredicted RBP9.07□□□□□ -0.96
HDAC9-213ENST00000433709 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
HDAC9-213ENST00000433709 CACNA2D2Q9NY47 1150 aa9.07□□□□□ -0.96
HDAC9-213ENST00000433709 CYP8B1Q9UNU6 501 aa9.07□□□□□ -0.96
HDAC9-213ENST00000433709 CARMIL2Q6F5E8 1435 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 PTPN11Q06124 597 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-213ENST00000433709 TSNAXIP1Q2TAA8 658 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 KIF4BQ2VIQ3 1234 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 DYMQ7RTS9 669 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 MRRFQ96E11 262 aaKnown RBP9.06□□□□□ -0.96
HDAC9-213ENST00000433709 MYRFLQ96LU7 910 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-213ENST00000433709 AP4E1Q9UPM8 1137 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 TLR6Q9Y2C9 796 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
HDAC9-213ENST00000433709 GAS2O43903 313 aaKnown RBP9.05□□□□□ -0.96
HDAC9-213ENST00000433709 TRIM37O94972 964 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 SLFN14P0C7P3 912 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 BMP3P12645 472 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 UVSSAQ2YD98 709 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 AGMOQ6ZNB7 445 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-213ENST00000433709 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 ACTL7BQ9Y614 415 aa9.05□□□□□ -0.96
HDAC9-213ENST00000433709 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
HDAC9-213ENST00000433709 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
HDAC9-213ENST00000433709 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 DHX15O43143 795 aaKnown RBP9.03□□□□□ -0.96
HDAC9-213ENST00000433709 USP11P51784 963 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 RPS26P62854 115 aaKnown RBP9.03□□□□□ -0.96
HDAC9-213ENST00000433709 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 PRR23CQ6ZRP0 262 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 PHC3Q8NDX5 983 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 FAM105AQ9NUU6 356 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 CRIM1Q9NZV1 1036 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 RUSC2Q8N2Y8 1516 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 SYNGAP1Q96PV0 1343 aa9.03□□□□□ -0.96
HDAC9-213ENST00000433709 RECKO95980 971 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 H2AFB1P0C5Y9 115 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 H2AFB2P0C5Z0 115 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 RLBP1P12271 317 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 VAMP1P23763 118 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 ASPAP45381 313 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 ID3Q02535 119 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 SEPT6Q14141 434 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
HDAC9-213ENST00000433709 FBLIM1Q8WUP2 373 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 GAL3ST3Q96A11 431 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 KCNF1Q9H3M0 494 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 PCDHA4Q9UN74 947 aa9.02□□□□□ -0.97
HDAC9-213ENST00000433709 DYRK3O43781 588 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 MAP4P27816 1152 aaKnown RBP9.01□□□□□ -0.97
HDAC9-213ENST00000433709 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC9-213ENST00000433709 SCARA3Q6AZY7 606 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-213ENST00000433709 RELL1Q8IUW5 271 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 FANCD2OSQ96PS1 177 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 RSRP1Q9BUV0 290 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 SEMA6BQ9H3T3 888 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 GSX1Q9H4S2 264 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-213ENST00000433709 DISC1Q9NRI5 854 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 GGT7Q9UJ14 662 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 CSADQ9Y600 493 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 RAPGEF2Q9Y4G8 1499 aa9.01□□□□□ -0.97
HDAC9-213ENST00000433709 PTPRGP23470 1445 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 HMX2A2RU54 273 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 DCDC2CA8MYV0 355 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 MINDY4BA8MYZ0 360 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 LMNB1P20700 586 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 RXRBP28702 533 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 GBP2P32456 591 aaPredicted RBP9□□□□□ -0.97
HDAC9-213ENST00000433709 CDK8P49336 464 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 INPP5AQ14642 412 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 BEND4Q6ZU67 534 aa9□□□□□ -0.97
HDAC9-213ENST00000433709 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms