RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
RTN1-204ENST00000432103 RPS12P25398 132 aaKnown RBP16.25■□□□□ 0.19
RTN1-204ENST00000432103 SCNN1DP51172 638 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 CTR9Q6PD62 1173 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 STOX1Q6ZVD7 989 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 TGFBRAP1Q8WUH2 860 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 MTA3Q9BTC8 594 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 LAMA4Q16363 1823 aa16.25■□□□□ 0.19
RTN1-204ENST00000432103 PSME4Q14997 1843 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 USP17L12C9JPN9 530 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 USP17L21D6R901 530 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 PDE4BQ07343 736 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 RHBDL3P58872 404 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
RTN1-204ENST00000432103 ARHGAP27Q6ZUM4 889 aa16.24■□□□□ 0.19
RTN1-204ENST00000432103 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
RTN1-204ENST00000432103 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
RTN1-204ENST00000432103 TBC1D10CQ8IV04 446 aa16.23■□□□□ 0.19
RTN1-204ENST00000432103 ESR2Q92731 530 aa16.23■□□□□ 0.19
RTN1-204ENST00000432103 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
RTN1-204ENST00000432103 TMEM87BQ96K49 555 aa16.23■□□□□ 0.19
RTN1-204ENST00000432103 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
RTN1-204ENST00000432103 TIAM2Q8IVF5 1701 aa16.23■□□□□ 0.19
RTN1-204ENST00000432103 USP17L8P0C7I0 530 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 CPA1P15085 419 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 LMNB1P20700 586 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 CTDSPL2Q05D32 466 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 CXCL9Q07325 125 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 Q6ZUG5 572 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
RTN1-204ENST00000432103 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
RTN1-204ENST00000432103 CWC22Q9HCG8 908 aaKnown RBP16.22■□□□□ 0.19
RTN1-204ENST00000432103 TOMM22Q9NS69 142 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 TAOK2Q9UL54 1235 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 SCN9AQ15858 1988 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
RTN1-204ENST00000432103 FLT1P17948 1338 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 APOBEC3HQ6NTF7 200 aaKnown RBP16.22■□□□□ 0.19
RTN1-204ENST00000432103 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 GMLQ99445 158 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 TMOD2Q9NZR1 351 aa16.22■□□□□ 0.19
RTN1-204ENST00000432103 FZD9O00144 591 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 PRC1O43663 620 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 RASSF7Q02833 373 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 AGXT2Q9BYV1 514 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 NBPF3Q9H094 633 aa16.21■□□□□ 0.19
RTN1-204ENST00000432103 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
RTN1-204ENST00000432103 ERICH2A1L162 156 aa16.21■□□□□ 0.18
RTN1-204ENST00000432103 FGRP09769 529 aa16.21■□□□□ 0.18
RTN1-204ENST00000432103 DLGAP5Q15398 846 aa16.21■□□□□ 0.18
RTN1-204ENST00000432103 CFAP100Q494V2 611 aa16.21■□□□□ 0.18
RTN1-204ENST00000432103 CDC42EP5Q6NZY7 148 aa16.21■□□□□ 0.18
RTN1-204ENST00000432103 ZNF646O15015 1829 aaPredicted RBP16.2■□□□□ 0.18
RTN1-204ENST00000432103 MYO1BO43795 1136 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 CUL4AQ13619 759 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
RTN1-204ENST00000432103 TMTC2Q8N394 836 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 MTMR14Q8NCE2 650 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
RTN1-204ENST00000432103 COL4A5P29400 1685 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 ROBO3Q96MS0 1386 aa16.2■□□□□ 0.18
RTN1-204ENST00000432103 B4E1Z4 1266 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 ORC4O43929 436 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
RTN1-204ENST00000432103 RRP12Q5JTH9 1297 aaKnown RBP16.19■□□□□ 0.18
RTN1-204ENST00000432103 DPF2Q92785 391 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 IDI2Q9BXS1 227 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 NEDD4P46934 1319 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 IQCA1Q86XH1 822 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 BRF1Q92994 677 aa16.19■□□□□ 0.18
RTN1-204ENST00000432103 KDM4AO75164 1064 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 WDHD1O75717 1129 aaPredicted RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 TCEANC2Q96MN5 208 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 LAMB1P07942 1786 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 NAV1Q8NEY1 1877 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 PICALMQ13492 652 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 OSBPL5Q9H0X9 879 aaPredicted RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 MKNK2Q9HBH9 465 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 ZSWIM5Q9P217 1185 aa16.18■□□□□ 0.18
RTN1-204ENST00000432103 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
RTN1-204ENST00000432103 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
RTN1-204ENST00000432103 ENTPD3O75355 529 aa16.17■□□□□ 0.18
RTN1-204ENST00000432103 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
RTN1-204ENST00000432103 LIFRP42702 1097 aa16.17■□□□□ 0.18
RTN1-204ENST00000432103 TPCN1Q9ULQ1 816 aa16.17■□□□□ 0.18
RTN1-204ENST00000432103 RANBP6O60518 1105 aaKnown RBP16.16■□□□□ 0.18
RTN1-204ENST00000432103 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
RTN1-204ENST00000432103 EVCP57679 992 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms