RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 MKI67P46013 3256 aaKnown RBP11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MAST3O60307 1309 aa11.75□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 BRCA2P51587 3418 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CACNB3P54284 484 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SOX10P56693 466 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 VGLL4Q14135 290 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MEIS3Q99687 375 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PTPN18Q99952 460 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SIL1Q9H173 461 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PDE4DIPQ5VU43 2346 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 IL15P40933 162 aaPredicted RBP11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MAP3K9P80192 1104 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CRHR2Q13324 411 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MFSD10Q14728 455 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TMOD2Q9NZR1 351 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SALL1Q9NSC2 1324 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SPDYE5A6NIY4 337 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 SEMA3EO15041 775 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 TBC1D12O60347 775 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PRDX5P30044 214 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 MTX1Q13505 466 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 BRI3BPQ8WY22 251 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 CSADQ9Y600 493 aa11.71□□□□□ -0.53
CDC42-IT1-201ENST00000431803 PHKA1P46020 1223 aa11.7□□□□□ -0.54
CDC42-IT1-201ENST00000431803 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
CDC42-IT1-201ENST00000431803 OTOP1Q7RTM1 612 aa11.7□□□□□ -0.54
CDC42-IT1-201ENST00000431803 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
CDC42-IT1-201ENST00000431803 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
CDC42-IT1-201ENST00000431803 PDS5AQ29RF7 1337 aaKnown RBP11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 GNAI3P08754 354 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TRIM27P14373 513 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ADORA1P30542 326 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 GTF2A2P52657 109 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CDC42EP5Q6NZY7 148 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 WRNIP1Q96S55 665 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 DENND2AQ9ULE3 1009 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
CDC42-IT1-201ENST00000431803 RFX7Q2KHR2 1363 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CCL15-CCL14A0A0B4J2E2 113 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 SRGAP3O43295 1099 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 LDHBP07195 334 aaKnown RBP11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CAP1Q01518 475 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 NFIAQ12857 509 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CCL15Q16663 113 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 DCAF15Q66K64 600 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ERO1BQ86YB8 467 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 GAKO14976 1311 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 IRF6O14896 467 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 SP3Q02447 781 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 PPIL2Q13356 520 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ATF7IPQ6VMQ6 1270 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZGPATQ8N5A5 531 aaKnown RBP11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 ZNF112Q9UJU3 913 aa11.67□□□□□ -0.54
CDC42-IT1-201ENST00000431803 A0A1B0GUL7 405 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 BCAR3O75815 825 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 CETPP11597 493 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TIMM10P62072 90 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TCP10Q12799 353 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TFCP2Q12800 502 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 TAF1CQ15572 869 aaPredicted RBP11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 MIGA2Q7L4E1 593 aa11.66□□□□□ -0.54
CDC42-IT1-201ENST00000431803 XAGE2Q96GT9 111 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms