RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 ZNF112Q9UJU3 913 aa11.17□□□□□ -0.62
HDAC9-211ENST00000430454 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
HDAC9-211ENST00000430454 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
HDAC9-211ENST00000430454 GJA5P36382 358 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 NFIAQ12857 509 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
HDAC9-211ENST00000430454 RPAP2Q8IXW5 612 aaPredicted RBP11.16□□□□□ -0.62
HDAC9-211ENST00000430454 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
HDAC9-211ENST00000430454 EFCC1Q9HA90 598 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 RCAN3Q9UKA8 241 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 TRIM17Q9Y577 477 aa11.16□□□□□ -0.62
HDAC9-211ENST00000430454 CXCL11O14625 94 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 IRF6O14896 467 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 TBC1D12O60347 775 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
HDAC9-211ENST00000430454 GNRH1P01148 92 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 PICALMQ13492 652 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 CEP85Q6P2H3 762 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 SCYL3Q8IZE3 742 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 PANK1Q8TE04 598 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 PTPN18Q99952 460 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
HDAC9-211ENST00000430454 DHX36Q9H2U1 1008 aaKnown RBP11.15□□□□□ -0.62
HDAC9-211ENST00000430454 RLBP1P12271 317 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 INPP5BP32019 993 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 MCAMP43121 646 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 NBPF11Q86T75 865 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 TEX11Q8IYF3 940 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 CLASRPQ8N2M8 674 aaKnown RBP11.14□□□□□ -0.63
HDAC9-211ENST00000430454 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 PARK7Q99497 189 aaKnown RBP11.14□□□□□ -0.63
HDAC9-211ENST00000430454 DBNDD2Q9BQY9 259 aa11.14□□□□□ -0.63
HDAC9-211ENST00000430454 AK9Q5TCS8 1911 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 TLR2O60603 784 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 HOXD10P28358 340 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 PRMT2P55345 433 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 PDE3AQ14432 1141 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
HDAC9-211ENST00000430454 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 AACSQ86V21 672 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 FAM43AQ8N2R8 423 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 CD99L2Q8TCZ2 262 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 KIF1BPQ96EK5 621 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC9-211ENST00000430454 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
HDAC9-211ENST00000430454 KCNH4Q9UQ05 1017 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 PTPN22Q9Y2R2 807 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 ZHX2Q9Y6X8 837 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 ATRNL1Q5VV63 1379 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 LAMB1P07942 1786 aa11.13□□□□□ -0.63
HDAC9-211ENST00000430454 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 BTBD19C9JJ37 291 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 PDHXO00330 501 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 PRKCSHP14314 528 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 RHBDL3P58872 404 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 PPP4CP60510 307 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 ZFPM1Q8IX07 1006 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 OSBPL5Q9H0X9 879 aaPredicted RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
HDAC9-211ENST00000430454 DBNLQ9UJU6 430 aaKnown RBP11.12□□□□□ -0.63
HDAC9-211ENST00000430454 DDTLA6NHG4 134 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 IDH1O75874 414 aaKnown RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 HLA-DOAP06340 250 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 PTPRAP18433 802 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 SOX10P56693 466 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 PABPC4Q13310 644 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 AATFQ9NY61 560 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 PNMA3Q9UL41 463 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 EXOC6BQ9Y2D4 811 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 SLC45A1Q9Y2W3 748 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
HDAC9-211ENST00000430454 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
HDAC9-211ENST00000430454 A0A0G2JLL6 359 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-211ENST00000430454 CYP2E1P05181 493 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-211ENST00000430454 CYP7A1P22680 504 aa11.1□□□□□ -0.63
HDAC9-211ENST00000430454 ZAP70P43403 619 aa11.1□□□□□ -0.63
HDAC9-211ENST00000430454 PRRT2Q7Z6L0 340 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-211ENST00000430454 RHPN1Q8TCX5 695 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms