RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZNF18P17022 549 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 NLRP6P59044 892 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 GRAMD1CQ8IYS0 662 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 ZMYND10O75800 440 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 IGKV5-2P06315 115 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 HSPD1P10809 573 aaKnown RBP12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 GBP3Q9H0R5 595 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 MAN1B1Q9UKM7 699 aa12.63□□□□□ -0.39
SEMA4D-209ENST00000429836 CPLX1O14810 134 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 HNRNPH1P31943 449 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 EIF5P55010 431 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 KCNV1Q6PIU1 500 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 GSPT2Q8IYD1 628 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 ACBD3Q9H3P7 528 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 HOXB7P09629 217 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 MAP2K2P36507 400 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 HAUS7Q99871 368 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 FAM169AQ9Y6X4 670 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 NWD1Q149M9 1564 aa12.62□□□□□ -0.39
SEMA4D-209ENST00000429836 NR1I3Q14994 352 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 ARHGEF25Q86VW2 580 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 BANK1Q8NDB2 785 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 CEP89Q96ST8 783 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 NAPGQ99747 312 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 HPCAL4Q9UM19 191 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 PTPAQ15257 358 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 TTC19Q6DKK2 380 aaPredicted RBP12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 PPFIBP1Q86W92 1011 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
SEMA4D-209ENST00000429836 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 MYO1BO43795 1136 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 RXRAP19793 462 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 GGCXP38435 758 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 PANX2Q96RD6 677 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 DSCC1Q9BVC3 393 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 SH3TC1Q8TE82 1336 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 STX17P56962 302 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
SEMA4D-209ENST00000429836 PRC1O43663 620 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 CASP14P31944 242 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 GRIN1Q05586 938 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 KLHL10Q6JEL2 608 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 UTYO14607 1347 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 MAST3O60307 1309 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 ZC3H4Q9UPT8 1303 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 ENC1O14682 589 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 AARSP49588 968 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 RASGRP2Q7LDG7 609 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 TRIM10Q9UDY6 481 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 SAMM50Q9Y512 469 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 FER1L4A9Z1Z3 1794 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 A0A1B0GTH6 734 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 M0R2C6 588 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 COBLO75128 1261 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 FXR1P51114 621 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 IRAK1P51617 712 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 STIM1Q13586 685 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 NUTM2AQ8IVF1 878 aaPredicted RBP12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 MAP3K14Q99558 947 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 PAG1Q9NWQ8 432 aa12.59□□□□□ -0.39
SEMA4D-209ENST00000429836 UBE2Q2LH0YL09 131 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 EBAG9O00559 213 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 MYL6BP14649 208 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 POSTNQ15063 836 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 KRT40Q6A162 431 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 WDR93Q6P2C0 686 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 JMYQ8N9B5 988 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 CCDC148Q8NFR7 591 aa12.58□□□□□ -0.4
SEMA4D-209ENST00000429836 ENOX1Q8TC92 643 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms