RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 TMEM88BA6NKF7 163 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 TNFRSF21O75509 655 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 HOXA5P20719 270 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 EHHADHQ08426 723 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 KCNA10Q16322 511 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 FYB2Q5VWT5 728 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 SMYD4Q8IYR2 804 aaPredicted RBP5.17□□□□□ -1.58
GYPB-201ENST00000429670 SNX29Q8TEQ0 813 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 WDR18Q9BV38 432 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 PRDM7Q9NQW5 492 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 PCOLCE2Q9UKZ9 415 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
GYPB-201ENST00000429670 GNEQ9Y223 722 aaKnown RBP5.17□□□□□ -1.58
GYPB-201ENST00000429670 A6NHS1 94 aa5.16□□□□□ -1.58
GYPB-201ENST00000429670 PEAR1Q5VY43 1037 aaPredicted RBP5.16□□□□□ -1.58
GYPB-201ENST00000429670 ALKBH2Q6NS38 261 aa5.16□□□□□ -1.58
GYPB-201ENST00000429670 DUSP23Q9BVJ7 150 aa5.16□□□□□ -1.58
GYPB-201ENST00000429670 AMOTL2Q9Y2J4 779 aa5.16□□□□□ -1.58
GYPB-201ENST00000429670 TCAF2A6NFQ2 919 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 METTL12A8MUP2 240 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 RNGTTO60942 597 aaKnown RBP5.15□□□□□ -1.59
GYPB-201ENST00000429670 AP3B2Q13367 1082 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 ATG14Q6ZNE5 492 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 RGS22Q8NE09 1264 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 C20orf173Q96LM9 149 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 GTF2IRD1Q9UHL9 959 aa5.15□□□□□ -1.59
GYPB-201ENST00000429670 TMPRSS2O15393 492 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 LEFTY1O75610 366 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 USP5P45974 858 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 MFAP1P55081 439 aaKnown RBP5.14□□□□□ -1.59
GYPB-201ENST00000429670 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 CCDC120Q96HB5 630 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 FANCD2OSQ96PS1 177 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 TRIM56Q9BRZ2 755 aaKnown RBP5.14□□□□□ -1.59
GYPB-201ENST00000429670 GZF1Q9H116 711 aaPredicted RBP5.14□□□□□ -1.59
GYPB-201ENST00000429670 NSUN3Q9H649 340 aaKnown RBP5.14□□□□□ -1.59
GYPB-201ENST00000429670 CD320Q9NPF0 282 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 U3KQE9 123 aa5.14□□□□□ -1.59
GYPB-201ENST00000429670 IGF2BP3O00425 579 aaKnown RBP eCLIP5.13□□□□□ -1.59
GYPB-201ENST00000429670 ECEL1O95672 775 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 B3GALT4O96024 378 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 ITIH2P19823 946 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 ID3Q02535 119 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 CLP1Q92989 425 aaKnown RBP5.13□□□□□ -1.59
GYPB-201ENST00000429670 DIRC2Q96SL1 478 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 LIN7BQ9HAP6 207 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 ZFYVE28Q9HCC9 887 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 DCP1AQ9NPI6 582 aaPredicted RBP5.13□□□□□ -1.59
GYPB-201ENST00000429670 LATS2Q9NRM7 1088 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 ZMIZ1Q9ULJ6 1067 aa5.13□□□□□ -1.59
GYPB-201ENST00000429670 SMG5Q9UPR3 1016 aaKnown RBP5.13□□□□□ -1.59
GYPB-201ENST00000429670 NUAK1O60285 661 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 FOXD2O60548 495 aaPredicted RBP5.12□□□□□ -1.59
GYPB-201ENST00000429670 GLDCP23378 1020 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 GDNFP39905 211 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 SPRED3Q2MJR0 410 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 SND1Q7KZF4 910 aaKnown RBP eCLIP5.12□□□□□ -1.595e-6■■■□□ 15.5
GYPB-201ENST00000429670 HELQQ8TDG4 1101 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 KCNN1Q92952 543 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 SSU72Q9NP77 194 aaKnown RBP5.12□□□□□ -1.59
GYPB-201ENST00000429670 PARD6AQ9NPB6 346 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 DISC1Q9NRI5 854 aa5.12□□□□□ -1.59
GYPB-201ENST00000429670 LIG1P18858 919 aa5.11□□□□□ -1.59
GYPB-201ENST00000429670 EIF1AXP47813 144 aaKnown RBP5.11□□□□□ -1.59
GYPB-201ENST00000429670 GRIA4P48058 902 aa5.11□□□□□ -1.59
GYPB-201ENST00000429670 EPB41L4BQ9H329 900 aa5.11□□□□□ -1.59
GYPB-201ENST00000429670 FOXD3Q9UJU5 478 aaPredicted RBP5.11□□□□□ -1.59
GYPB-201ENST00000429670 POLIQ9UNA4 740 aa5.11□□□□□ -1.59
GYPB-201ENST00000429670 A0A1W2PP55 124 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 SYN1P17600 705 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 CLCN7P51798 805 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 AAMPQ13685 434 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 TTLL4Q14679 1199 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 TOP6BLQ8N6T0 577 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 STK32AQ8WU08 396 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 HEXIM2Q96MH2 286 aaKnown RBP5.1□□□□□ -1.59
GYPB-201ENST00000429670 SLC26A8Q96RN1 970 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 TCF12Q99081 682 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 KRTAP9-8Q9BYQ0 159 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 ZCCHC4Q9H5U6 513 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 SEPT3Q9UH03 358 aa5.1□□□□□ -1.59
GYPB-201ENST00000429670 ETV2O00321 342 aaPredicted RBP5.09□□□□□ -1.59
GYPB-201ENST00000429670 CCDC27Q2M243 656 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 TMEM164Q5U3C3 297 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 FAM214BQ7L5A3 538 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 NPAS4Q8IUM7 802 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.09□□□□□ -1.59
GYPB-201ENST00000429670 SPACA3Q8IXA5 215 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 KRT82Q9NSB4 513 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 IVNS1ABPQ9Y6Y0 642 aa5.09□□□□□ -1.59
GYPB-201ENST00000429670 GNAT3A8MTJ3 354 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 HCLS1P14317 486 aaPredicted RBP5.08□□□□□ -1.6
GYPB-201ENST00000429670 LINC00310P59036 64 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 PTPN12Q05209 780 aaKnown RBP5.08□□□□□ -1.6
GYPB-201ENST00000429670 KIF4BQ2VIQ3 1234 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 TXNDC2Q86VQ3 553 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 GALNT12Q8IXK2 581 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 BORCS6Q96GS4 357 aa5.08□□□□□ -1.6
GYPB-201ENST00000429670 IRF2BPLQ9H1B7 796 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms