RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 CDH23Q9H251 3354 aa14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 NFIAQ12857 509 aa14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 FASTKD5Q7L8L6 764 aaKnown RBP14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 MYH2Q9UKX2 1941 aa14.68□□□□□ -0.06
ALMS1P1-201ENST00000428767 FRMPD3Q5JV73 1810 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 GRM8O00222 908 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 HMGCRP04035 888 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 MDM2Q00987 491 aaPredicted RBP14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 CAVIN4Q5BKX8 364 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 BEND3Q5T5X7 828 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 HHIPL2Q6UWX4 724 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 PICK1Q9NRD5 415 aa14.67□□□□□ -0.06
ALMS1P1-201ENST00000428767 PFASO15067 1338 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 ATAD5Q96QE3 1844 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 DIXDC1Q155Q3 683 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 HMX1Q9NP08 348 aaPredicted RBP14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 PRDM6Q9NQX0 595 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 DAGLAQ9Y4D2 1042 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
ALMS1P1-201ENST00000428767 LOC285556D6RIA3 1793 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 PTPRAP18433 802 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 ZFPM1Q8IX07 1006 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 SCYL3Q8IZE3 742 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 C9orf78Q9NZ63 289 aaPredicted RBP14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 FAM198AQ9UFP1 575 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 MUC3AQ02505 3323 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 MAST2Q6P0Q8 1798 aa14.65□□□□□ -0.06
ALMS1P1-201ENST00000428767 SLURP2P0DP57 97 aa14.64□□□□□ -0.07
ALMS1P1-201ENST00000428767 SUCLG2Q96I99 432 aa14.64□□□□□ -0.07
ALMS1P1-201ENST00000428767 SLC45A1Q9Y2W3 748 aa14.64□□□□□ -0.07
ALMS1P1-201ENST00000428767 SUGT1Q9Y2Z0 365 aa14.64□□□□□ -0.07
ALMS1P1-201ENST00000428767 TTC28Q96AY4 2481 aa14.64□□□□□ -0.07
ALMS1P1-201ENST00000428767 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 ATRNL1Q5VV63 1379 aa14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 DDX10Q13206 875 aaKnown RBP14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 TREML2Q5T2D2 321 aa14.63□□□□□ -0.07
ALMS1P1-201ENST00000428767 POTEB2H3BUK9 544 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 VGLL2Q8N8G2 317 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 OGDHLQ9ULD0 1010 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 AGTPBP1Q9UPW5 1226 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 LRRFIP2Q9Y608 721 aaKnown RBP14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 LTBP2Q14767 1821 aa14.62□□□□□ -0.07
ALMS1P1-201ENST00000428767 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 ZNF697Q5TEC3 545 aa14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 FAM109BQ6ICB4 259 aaPredicted RBP14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 MAFAQ8NHW3 353 aaPredicted RBP14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 TRIB2Q92519 343 aa14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 KAZALD1Q96I82 304 aa14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 PNMA3Q9UL41 463 aa14.61□□□□□ -0.07
ALMS1P1-201ENST00000428767 PDE8BO95263 885 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 CYP2B6P20813 491 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 PRDX5P30044 214 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 RGS3P49796 1198 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 KLHDC4Q8TBB5 520 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 WDR66Q8TBY9 1149 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 FANCIQ9NVI1 1328 aa14.6□□□□□ -0.07
ALMS1P1-201ENST00000428767 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
ALMS1P1-201ENST00000428767 WWC1Q8IX03 1113 aa14.59□□□□□ -0.07
ALMS1P1-201ENST00000428767 CDX2Q99626 313 aaPredicted RBP14.59□□□□□ -0.07
ALMS1P1-201ENST00000428767 BICC1Q9H694 974 aaKnown RBP14.59□□□□□ -0.07
ALMS1P1-201ENST00000428767 COL6A1P12109 1028 aa14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 COL9A1P20849 921 aa14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 PUM3Q15397 648 aaKnown RBP14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 SH3BP5LQ7L8J4 393 aa14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 LBHD1Q9BQE6 289 aaPredicted RBP14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 RAPGEFL1Q9UHV5 662 aa14.58□□□□□ -0.08
ALMS1P1-201ENST00000428767 DDTLA6NHG4 134 aaPredicted RBP14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 FAM196BA6NMK8 535 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 PEX10O60683 326 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 CTNND1O60716 968 aaKnown RBP14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 VAMP4O75379 141 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 LDHBP07195 334 aaKnown RBP14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 NBPF7P0C2Y1 421 aaPredicted RBP14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 FGFR2P21802 821 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 SRCIN1Q9C0H9 1055 aa14.57□□□□□ -0.08
ALMS1P1-201ENST00000428767 SLC5A1P13866 664 aa14.56□□□□□ -0.08
ALMS1P1-201ENST00000428767 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
ALMS1P1-201ENST00000428767 HMGCS2P54868 508 aa14.56□□□□□ -0.08
ALMS1P1-201ENST00000428767 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
ALMS1P1-201ENST00000428767 PICALMQ13492 652 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms