RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CDC42EP5Q6NZY7 148 aa10.19□□□□□ -0.78
CSTF1-203ENST00000428552 PRRT2Q7Z6L0 340 aaPredicted RBP10.19□□□□□ -0.78
CSTF1-203ENST00000428552 ANKRD44Q8N8A2 993 aa10.19□□□□□ -0.78
CSTF1-203ENST00000428552 TMOD2Q9NZR1 351 aa10.19□□□□□ -0.78
CSTF1-203ENST00000428552 DAGLAQ9Y4D2 1042 aa10.19□□□□□ -0.78
CSTF1-203ENST00000428552 EYSQ5T1H1 3165 aa10.19□□□□□ -0.78
CSTF1-203ENST00000428552 RFX7Q2KHR2 1363 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 UTYO14607 1347 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 PDE8BO95263 885 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 NBPF7P0C2Y1 421 aaPredicted RBP10.18□□□□□ -0.78
CSTF1-203ENST00000428552 DIXDC1Q155Q3 683 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 RABL6Q3YEC7 729 aaPredicted RBP10.18□□□□□ -0.78
CSTF1-203ENST00000428552 SH3BP5LQ7L8J4 393 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 C7orf61Q8IZ16 206 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 ZMYND8Q9ULU4 1186 aaPredicted RBP10.18□□□□□ -0.78
CSTF1-203ENST00000428552 SUGT1Q9Y2Z0 365 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 AFG3L2Q9Y4W6 797 aa10.18□□□□□ -0.78
CSTF1-203ENST00000428552 DDX60LQ5H9U9 1706 aaKnown RBP10.18□□□□□ -0.78
CSTF1-203ENST00000428552 LAMA2P24043 3122 aaKnown RBP10.18□□□□□ -0.78
CSTF1-203ENST00000428552 DOCK2Q92608 1830 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 MAST3O60307 1309 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 KIF16BQ96L93 1317 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 SYN1P17600 705 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 CAPN2P17655 700 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 PTPRAP18433 802 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 MAP3K10Q02779 954 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 EXOSC9Q06265 439 aaKnown RBP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 TRIM32Q13049 653 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 VPS37DQ86XT2 251 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 KLHDC4Q8TBB5 520 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 BICC1Q9H694 974 aaKnown RBP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 SLC45A1Q9Y2W3 748 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 ZHX2Q9Y6X8 837 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 DOCK3Q8IZD9 2030 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 COL2A1P02458 1487 aaPredicted RBP10.17□□□□□ -0.78
CSTF1-203ENST00000428552 PLXNB2O15031 1838 aa10.17□□□□□ -0.78
CSTF1-203ENST00000428552 TNPO2O14787 897 aaKnown RBP10.16□□□□□ -0.78
CSTF1-203ENST00000428552 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 PRDX5P30044 214 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 CAVIN4Q5BKX8 364 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 METTL24Q5JXM2 366 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 NECAB2Q7Z6G3 386 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 SCYL3Q8IZE3 742 aa10.16□□□□□ -0.78
CSTF1-203ENST00000428552 SPINK5Q9NQ38 1064 aaPredicted RBP10.16□□□□□ -0.78
CSTF1-203ENST00000428552 C9orf78Q9NZ63 289 aaPredicted RBP10.16□□□□□ -0.78
CSTF1-203ENST00000428552 DOCK1Q14185 1865 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 PFASO15067 1338 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.78
CSTF1-203ENST00000428552 TREML2Q5T2D2 321 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 FASTKD5Q7L8L6 764 aaKnown RBP10.15□□□□□ -0.78
CSTF1-203ENST00000428552 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
CSTF1-203ENST00000428552 TDHQ8IZJ6 230 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 GJD2Q9UKL4 321 aa10.15□□□□□ -0.78
CSTF1-203ENST00000428552 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.79
CSTF1-203ENST00000428552 LOC285556D6RIA3 1793 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 GADL1Q6ZQY3 521 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 ANKRD13CQ8N6S4 541 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 GUCD1Q96NT3 240 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 SRCIN1Q9C0H9 1055 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 USP40Q9NVE5 1235 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 OGDHLQ9ULD0 1010 aa10.14□□□□□ -0.79
CSTF1-203ENST00000428552 DDTLA6NHG4 134 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-203ENST00000428552 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 HMGCRP04035 888 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 COL6A1P12109 1028 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 RFX5P48382 616 aaPredicted RBP10.13□□□□□ -0.79
CSTF1-203ENST00000428552 RGS3P49796 1198 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 PUM3Q15397 648 aaKnown RBP10.13□□□□□ -0.79
CSTF1-203ENST00000428552 FAM110CQ1W6H9 321 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 SLC4A10Q6U841 1118 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
CSTF1-203ENST00000428552 WDR66Q8TBY9 1149 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 IDI2Q9BXS1 227 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 NBPF3Q9H094 633 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 C11orf49Q9H6J7 331 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 DDX4Q9NQI0 724 aaKnown RBP10.13□□□□□ -0.79
CSTF1-203ENST00000428552 AGTPBP1Q9UPW5 1226 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 AK9Q5TCS8 1911 aa10.13□□□□□ -0.79
CSTF1-203ENST00000428552 GAKO14976 1311 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 RPTORQ8N122 1335 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 TRIM75PA6NK02 468 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 ATG9AQ7Z3C6 839 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
CSTF1-203ENST00000428552 TRIB2Q92519 343 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 COA7Q96BR5 231 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 PICK1Q9NRD5 415 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 CDH23Q9H251 3354 aa10.12□□□□□ -0.79
CSTF1-203ENST00000428552 SALL1Q9NSC2 1324 aa10.11□□□□□ -0.79
CSTF1-203ENST00000428552 DNAH12Q6ZR08 3092 aa10.11□□□□□ -0.79
CSTF1-203ENST00000428552 PRUNE2Q8WUY3 3088 aa10.11□□□□□ -0.79
CSTF1-203ENST00000428552 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
CSTF1-203ENST00000428552 ENTPD3O75355 529 aa10.11□□□□□ -0.79
CSTF1-203ENST00000428552 IFIT1P09914 478 aaKnown RBP10.11□□□□□ -0.79
CSTF1-203ENST00000428552 RRP1BQ14684 758 aaKnown RBP10.11□□□□□ -0.79
CSTF1-203ENST00000428552 WDR63Q8IWG1 891 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms