RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 C12orf60Q5U649 245 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 FKBP1CQ5VVH2 108 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 DPY19L2Q6NUT2 758 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 STOX1Q6ZVD7 989 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 MAPKAPK5Q8IW41 473 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 ZNF70Q9UC06 446 aaPredicted RBP14.87□□□□□ -0.03
TRIM39-207ENST00000428404 FAM198AQ9UFP1 575 aa14.87□□□□□ -0.03
TRIM39-207ENST00000428404 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 GLTPD2A6NH11 291 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 FGRP09769 529 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 EPS15P42566 896 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 HAND2P61296 217 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 PPARAQ07869 468 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 KRT32Q14532 448 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 RABEP1Q15276 862 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 NBPF9Q3BBW0 867 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 SAMD7Q7Z3H4 446 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 ARPP21Q9UBL0 812 aaPredicted RBP14.86□□□□□ -0.03
TRIM39-207ENST00000428404 TACC3Q9Y6A5 838 aa14.86□□□□□ -0.03
TRIM39-207ENST00000428404 E7EWF7 191 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 SMIM22K7EJ46 135 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 ENTPD3O75355 529 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 CYP2D6P10635 497 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 CACNB3P54284 484 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 TBC1D10CQ8IV04 446 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 ZFPM1Q8IX07 1006 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
TRIM39-207ENST00000428404 OSBPL5Q9H0X9 879 aaPredicted RBP14.85□□□□□ -0.03
TRIM39-207ENST00000428404 MINDY4BA8MYZ0 360 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 PSMA5P28066 241 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 HIRAP54198 1017 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-207ENST00000428404 EVX2Q03828 476 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 CTDSPL2Q05D32 466 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 COL9A3Q14050 684 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-207ENST00000428404 KIF4BQ2VIQ3 1234 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 TBC1D10BQ4KMP7 808 aaPredicted RBP14.84□□□□□ -0.03
TRIM39-207ENST00000428404 AKNAD1Q5T1N1 836 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 STAG1Q8WVM7 1258 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 JAKMIP1Q96N16 626 aaKnown RBP14.84□□□□□ -0.03
TRIM39-207ENST00000428404 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
TRIM39-207ENST00000428404 FOCADQ5VW36 1801 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 CLRN2A0PK11 232 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 MYO1BO43795 1136 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 PCP11498 1178 aaKnown RBP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 PLCD1P51178 756 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 PICALMQ13492 652 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 RBM26Q5T8P6 1007 aaKnown RBP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 SH3BP5LQ7L8J4 393 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 FAM83AQ86UY5 434 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 TRPM4Q8TD43 1214 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 NEK1Q96PY6 1258 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 DHX36Q9H2U1 1008 aaKnown RBP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 INCENPQ9NQS7 918 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 TMOD2Q9NZR1 351 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 CNTNAP1P78357 1384 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 ATRNL1Q5VV63 1379 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 ROBO3Q96MS0 1386 aa14.83□□□□□ -0.04
TRIM39-207ENST00000428404 DDX60LQ5H9U9 1706 aaKnown RBP14.83□□□□□ -0.04
TRIM39-207ENST00000428404 COL2A1P02458 1487 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 POLR3DP05423 398 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 HMGB1P09429 215 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 EXOSC10Q01780 885 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 MFSD6Q6ZSS7 791 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 RUFY3Q7L099 469 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 METTL16Q86W50 562 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 NKX2-3Q8TAU0 364 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 FAM151AQ8WW52 585 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 TTC14Q96N46 770 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 ALDH8A1Q9H2A2 487 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 ADARB2Q9NS39 739 aaKnown RBP14.82□□□□□ -0.04
TRIM39-207ENST00000428404 PGAP2Q9UHJ9 254 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 TAOK2Q9UL54 1235 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 LAMA4Q16363 1823 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 ECM29Q5VYK3 1845 aa14.82□□□□□ -0.04
TRIM39-207ENST00000428404 DDTLA6NHG4 134 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-207ENST00000428404 POTECB2RU33 542 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 TCP10L2B9ZVM9 353 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 ORC4O43929 436 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 SLC3A2P08195 630 aaKnown RBP14.81□□□□□ -0.04
TRIM39-207ENST00000428404 CASTP20810 708 aaKnown RBP14.81□□□□□ -0.04
TRIM39-207ENST00000428404 RPS6KB1P23443 525 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 NEK4P51957 841 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 GABPAQ06546 454 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 TCP10Q12799 353 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 TTC6Q86TZ1 520 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 AMOTL1Q8IY63 956 aa14.81□□□□□ -0.04
TRIM39-207ENST00000428404 MB21D2Q8IYB1 491 aaPredicted RBP14.81□□□□□ -0.04
TRIM39-207ENST00000428404 NCOA7Q8NI08 942 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms