RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 FASTKD5Q7L8L6 764 aaKnown RBP10.29□□□□□ -0.76
ITSN1-216ENST00000428240 COL25A1Q9BXS0 654 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-216ENST00000428240 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
ITSN1-216ENST00000428240 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.29□□□□□ -0.76
ITSN1-216ENST00000428240 SPINK5Q9NQ38 1064 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-216ENST00000428240 MTMR10Q9NXD2 777 aa10.29□□□□□ -0.76
ITSN1-216ENST00000428240 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.29□□□□□ -0.76
ITSN1-216ENST00000428240 AFG3L2Q9Y4W6 797 aa10.29□□□□□ -0.76
ITSN1-216ENST00000428240 MGAMO43451 1857 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 ALDH1L1O75891 902 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 CAPN2P17655 700 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 PRDX5P30044 214 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 MAGEA10P43363 369 aaPredicted RBP10.28□□□□□ -0.76
ITSN1-216ENST00000428240 TRIM32Q13049 653 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 LRIT3Q3SXY7 679 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 RABL6Q3YEC7 729 aaPredicted RBP10.28□□□□□ -0.76
ITSN1-216ENST00000428240 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
ITSN1-216ENST00000428240 SCYL3Q8IZE3 742 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 ANKRD13CQ8N6S4 541 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 ANKRD44Q8N8A2 993 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 SMCR8Q8TEV9 937 aaPredicted RBP10.28□□□□□ -0.76
ITSN1-216ENST00000428240 USP40Q9NVE5 1235 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 SLC45A1Q9Y2W3 748 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 SALL2Q9Y467 1007 aaPredicted RBP10.28□□□□□ -0.76
ITSN1-216ENST00000428240 ALPK3Q96L96 1907 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 UTYO14607 1347 aa10.28□□□□□ -0.76
ITSN1-216ENST00000428240 EYSQ5T1H1 3165 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 TRIM75PA6NK02 468 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 TREML2Q5T2D2 321 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 SH3BP5LQ7L8J4 393 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 TDHQ8IZJ6 230 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 WDR66Q8TBY9 1149 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 COA7Q96BR5 231 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 PICK1Q9NRD5 415 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 SPTBN5Q9NRC6 3674 aaKnown RBP10.27□□□□□ -0.77
ITSN1-216ENST00000428240 KIF16BQ96L93 1317 aa10.27□□□□□ -0.77
ITSN1-216ENST00000428240 IFIT1P09914 478 aaKnown RBP10.26□□□□□ -0.77
ITSN1-216ENST00000428240 ZEB1P37275 1124 aaPredicted RBP10.26□□□□□ -0.77
ITSN1-216ENST00000428240 PUM3Q15397 648 aaKnown RBP10.26□□□□□ -0.77
ITSN1-216ENST00000428240 ANKLE1Q8NAG6 615 aa10.26□□□□□ -0.77
ITSN1-216ENST00000428240 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
ITSN1-216ENST00000428240 CUL9Q8IWT3 2517 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 DDTLA6NHG4 134 aaPredicted RBP10.25□□□□□ -0.77
ITSN1-216ENST00000428240 HMGCRP04035 888 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 RGS3P49796 1198 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 MAP3K10Q02779 954 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 C11orf49Q9H6J7 331 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 GJD2Q9UKL4 321 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 AGTPBP1Q9UPW5 1226 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 RPTORQ8N122 1335 aa10.25□□□□□ -0.77
ITSN1-216ENST00000428240 CTNND1O60716 968 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 LDHBP07195 334 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 SLC5A1P13866 664 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 FAM110CQ1W6H9 321 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 NCBP3Q53F19 620 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 WDR63Q8IWG1 891 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 ZSCAN29Q8IWY8 852 aaPredicted RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 LPIN2Q92539 896 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 IDI2Q9BXS1 227 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 UBE2OQ9C0C9 1292 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 HMX1Q9NP08 348 aaPredicted RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 DDX4Q9NQI0 724 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 OGDHLQ9ULD0 1010 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 LRRFIP2Q9Y608 721 aaKnown RBP10.24□□□□□ -0.77
ITSN1-216ENST00000428240 PFASO15067 1338 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
ITSN1-216ENST00000428240 CACNA1FO60840 1977 aa10.23□□□□□ -0.77
ITSN1-216ENST00000428240 ENTPD3O75355 529 aa10.23□□□□□ -0.77
ITSN1-216ENST00000428240 RFX5P48382 616 aaPredicted RBP10.23□□□□□ -0.77
ITSN1-216ENST00000428240 TRIB2Q92519 343 aa10.23□□□□□ -0.77
ITSN1-216ENST00000428240 GUCD1Q96NT3 240 aa10.23□□□□□ -0.77
ITSN1-216ENST00000428240 LAMA2P24043 3122 aaKnown RBP10.23□□□□□ -0.77
ITSN1-216ENST00000428240 DDX60LQ5H9U9 1706 aaKnown RBP10.22□□□□□ -0.77
ITSN1-216ENST00000428240 FAM196BA6NMK8 535 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 EYA2O00167 538 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
ITSN1-216ENST00000428240 PICALMQ13492 652 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 ATG9AQ7Z3C6 839 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 FAM161BQ96MY7 647 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 SALL1Q9NSC2 1324 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 CDH23Q9H251 3354 aa10.22□□□□□ -0.77
ITSN1-216ENST00000428240 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 DOCK2Q92608 1830 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 AK9Q5TCS8 1911 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 PEX10O60683 326 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 COL6A1P12109 1028 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 CYP2B6P20813 491 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 PHKA1P46020 1223 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 SPP2Q13103 211 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 LRRC26Q2I0M4 334 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 PROCA1Q8NCQ7 364 aaPredicted RBP10.21□□□□□ -0.77
ITSN1-216ENST00000428240 USP44Q9H0E7 712 aa10.21□□□□□ -0.77
ITSN1-216ENST00000428240 ASCC2Q9H1I8 757 aaPredicted RBP10.21□□□□□ -0.77
ITSN1-216ENST00000428240 GAKO14976 1311 aa10.21□□□□□ -0.78
ITSN1-216ENST00000428240 PTPRFP10586 1907 aa10.21□□□□□ -0.78
ITSN1-216ENST00000428240 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms