RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
RDH11-202ENST00000428130 ATRNL1Q5VV63 1379 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 A0A0G2JLL6 359 aaPredicted RBP12.98□□□□□ -0.33
RDH11-202ENST00000428130 TNPO2O14787 897 aaKnown RBP12.98□□□□□ -0.33
RDH11-202ENST00000428130 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 PDE8BO95263 885 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 NFIAQ12857 509 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 Q7L0L9 218 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 PRRT2Q7Z6L0 340 aaPredicted RBP12.98□□□□□ -0.33
RDH11-202ENST00000428130 STXBP5LQ9Y2K9 1186 aa12.98□□□□□ -0.33
RDH11-202ENST00000428130 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 LRIT3Q3SXY7 679 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 FASTKD5Q7L8L6 764 aaKnown RBP12.97□□□□□ -0.33
RDH11-202ENST00000428130 C7orf61Q8IZ16 206 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 FAM198AQ9UFP1 575 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 SLC45A1Q9Y2W3 748 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 DAGLAQ9Y4D2 1042 aa12.97□□□□□ -0.33
RDH11-202ENST00000428130 PRUNE2Q8WUY3 3088 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 PHF20L1A8MW92 1017 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
RDH11-202ENST00000428130 EXOSC9Q06265 439 aaKnown RBP12.96□□□□□ -0.33
RDH11-202ENST00000428130 DIXDC1Q155Q3 683 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 RABL6Q3YEC7 729 aaPredicted RBP12.96□□□□□ -0.33
RDH11-202ENST00000428130 SCYL3Q8IZE3 742 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 ANKLE1Q8NAG6 615 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.96□□□□□ -0.33
RDH11-202ENST00000428130 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
RDH11-202ENST00000428130 AFG3L2Q9Y4W6 797 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 FRMPD3Q5JV73 1810 aa12.96□□□□□ -0.33
RDH11-202ENST00000428130 UTYO14607 1347 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 PTPRAP18433 802 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 FGFR2P21802 821 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 GADL1Q6ZQY3 521 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 ZFPM1Q8IX07 1006 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
RDH11-202ENST00000428130 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
RDH11-202ENST00000428130 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
RDH11-202ENST00000428130 SLC4A10Q6U841 1118 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 TDHQ8IZJ6 230 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 KLHDC4Q8TBB5 520 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
RDH11-202ENST00000428130 COA7Q96BR5 231 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
RDH11-202ENST00000428130 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
RDH11-202ENST00000428130 SYN1P17600 705 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 PRDX5P30044 214 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 MAGEA10P43363 369 aaPredicted RBP12.93□□□□□ -0.34
RDH11-202ENST00000428130 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
RDH11-202ENST00000428130 ANKRD13CQ8N6S4 541 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 PICK1Q9NRD5 415 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
RDH11-202ENST00000428130 MAST2Q6P0Q8 1798 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 HMGCRP04035 888 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 MAP3K10Q02779 954 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 FAM110CQ1W6H9 321 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
RDH11-202ENST00000428130 AGTPBP1Q9UPW5 1226 aa12.92□□□□□ -0.34
RDH11-202ENST00000428130 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
RDH11-202ENST00000428130 RPTORQ8N122 1335 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 CDH23Q9H251 3354 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 ENTPD3O75355 529 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 SLURP2P0DP57 97 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 ZEB1P37275 1124 aaPredicted RBP12.91□□□□□ -0.34
RDH11-202ENST00000428130 RGS3P49796 1198 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 TRIM32Q13049 653 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 TREML2Q5T2D2 321 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 SH3BP5LQ7L8J4 393 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 C11orf49Q9H6J7 331 aa12.91□□□□□ -0.34
RDH11-202ENST00000428130 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.91□□□□□ -0.34
RDH11-202ENST00000428130 CTNND1O60716 968 aaKnown RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 SLC5A1P13866 664 aa12.9□□□□□ -0.34
RDH11-202ENST00000428130 CCDC84Q86UT8 332 aaPredicted RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
RDH11-202ENST00000428130 LPIN2Q92539 896 aa12.9□□□□□ -0.34
RDH11-202ENST00000428130 UBE2OQ9C0C9 1292 aaKnown RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 GJD2Q9UKL4 321 aa12.9□□□□□ -0.34
RDH11-202ENST00000428130 PNMA3Q9UL41 463 aa12.9□□□□□ -0.34
RDH11-202ENST00000428130 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
RDH11-202ENST00000428130 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
RDH11-202ENST00000428130 PFASO15067 1338 aa12.89□□□□□ -0.35
RDH11-202ENST00000428130 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
RDH11-202ENST00000428130 DDTLA6NHG4 134 aaPredicted RBP12.89□□□□□ -0.35
RDH11-202ENST00000428130 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
RDH11-202ENST00000428130 GAKO14976 1311 aa12.88□□□□□ -0.35
RDH11-202ENST00000428130 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms