RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 APOA5Q6Q788 366 aa31.2■■■□□ 2.59
SH3GL3-202ENST00000427482 DPP8Q6V1X1 898 aaPredicted RBP31.2■■■□□ 2.59
SH3GL3-202ENST00000427482 TBC1D22AQ8WUA7 517 aa31.2■■■□□ 2.59
SH3GL3-202ENST00000427482 CYP2D7A0A087X1C5 515 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 PCP11498 1178 aaKnown RBP31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 DIXDC1Q155Q3 683 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 STK11IPQ8N1F8 1099 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 TMX4Q9H1E5 349 aaPredicted RBP31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 GDPD2Q9HCC8 539 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 MROH7-TTC4A0A0A0MT08 1334 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 DLEC1Q9Y238 1755 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 USP17L12C9JPN9 530 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 USP17L21D6R901 530 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 SMIM22K7EJ46 135 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 FGRP09769 529 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 PPP4CP60510 307 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 USP48Q86UV5 1035 aa31.19■■■□□ 2.58
SH3GL3-202ENST00000427482 RIMBP2O15034 1052 aa31.18■■■□□ 2.58
SH3GL3-202ENST00000427482 MFSD14BQ5SR56 506 aa31.18■■■□□ 2.58
SH3GL3-202ENST00000427482 FERMT3Q86UX7 667 aa31.18■■■□□ 2.58
SH3GL3-202ENST00000427482 RAB11FIP4Q86YS3 637 aa31.18■■■□□ 2.58
SH3GL3-202ENST00000427482 ARPP21Q9UBL0 812 aaPredicted RBP31.18■■■□□ 2.58
SH3GL3-202ENST00000427482 BAG3O95817 575 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 MBD3O95983 291 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 DNM1Q05193 864 aaKnown RBP31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 SART3Q15020 963 aaKnown RBP31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 SBK1Q52WX2 424 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 DEFB132Q7Z7B7 95 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 ESR2Q92731 530 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 ZC3H12CQ9C0D7 883 aaKnown RBP31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 H3BQV1 296 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 FDPSP14324 419 aaKnown RBP31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 IFFO2Q5TF58 517 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 NFXL1Q6ZNB6 911 aa31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 RTFDC1Q9BY42 306 aaPredicted RBP31.17■■■□□ 2.58
SH3GL3-202ENST00000427482 ECM29Q5VYK3 1845 aa31.16■■■□□ 2.58
SH3GL3-202ENST00000427482 METAP2P50579 478 aaKnown RBP eCLIP31.16■■■□□ 2.58
SH3GL3-202ENST00000427482 NOL10Q9BSC4 688 aaKnown RBP31.16■■■□□ 2.58
SH3GL3-202ENST00000427482 CPLX1O14810 134 aa31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 ZBTB43O43298 467 aa31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 CERS3Q8IU89 383 aa31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 SH3RF3Q8TEJ3 882 aaPredicted RBP31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 MKRN1Q9UHC7 482 aaKnown RBP31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 NID2Q14112 1375 aa31.15■■■□□ 2.58
SH3GL3-202ENST00000427482 NCLP19338 710 aaKnown RBP31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 CCDC69A6NI79 296 aa31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 RESTQ13127 1097 aa31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 WTAPQ15007 396 aa31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 ZKSCAN3Q9BRR0 538 aa31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.14■■■□□ 2.58
SH3GL3-202ENST00000427482 ERICH2A1L162 156 aa31.13■■■□□ 2.57
SH3GL3-202ENST00000427482 GTF2IP78347 998 aa31.13■■■□□ 2.57
SH3GL3-202ENST00000427482 SLC12A7Q9Y666 1083 aa31.13■■■□□ 2.57
SH3GL3-202ENST00000427482 FOCADQ5VW36 1801 aa31.13■■■□□ 2.57
SH3GL3-202ENST00000427482 DDX60LQ5H9U9 1706 aaKnown RBP31.13■■■□□ 2.57
SH3GL3-202ENST00000427482 FIBPO43427 364 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 CSPP1Q1MSJ5 1256 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 CAVIN1Q6NZI2 390 aaKnown RBP31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 MICU3Q86XE3 530 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 TMTC2Q8N394 836 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 FAM163AQ96GL9 167 aaPredicted RBP31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 EYA3Q99504 573 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 GPR75-ASB3A0A0A6YYF3 556 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 ORC4O43929 436 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 PPFIA3O75145 1194 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 CHRNA5P30532 468 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 USP5P45974 858 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 SLF2Q8IX21 1173 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 CNKSR1Q969H4 720 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 UBAC1Q9BSL1 405 aa31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 ZSCAN16Q9H4T2 348 aaPredicted RBP31.12■■■□□ 2.57
SH3GL3-202ENST00000427482 GOLGA8AA7E2F4 631 aa31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 GADD45BO75293 160 aaPredicted RBP31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 RXRAP19793 462 aa31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 KRT85P78386 507 aa31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 PDGFDQ9GZP0 370 aaPredicted RBP31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 MCM9Q9NXL9 1143 aa31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 ORC3Q9UBD5 711 aaPredicted RBP31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 GAKO14976 1311 aa31.11■■■□□ 2.57
SH3GL3-202ENST00000427482 CDKL5O76039 1030 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 SLC3A2P08195 630 aaKnown RBP31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 CYP2D6P10635 497 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 BTDP43251 543 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 EVX2Q03828 476 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 SEC23AQ15436 765 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 SUGT1Q9Y2Z0 365 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 FSD2A1L4K1 749 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 CDC27P30260 824 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 ADD1P35611 737 aaKnown RBP31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 FAM173BQ6P4H8 233 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 SYNE3Q6ZMZ3 975 aa31.1■■■□□ 2.57
SH3GL3-202ENST00000427482 C10orf71Q711Q0 1435 aa31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 USP17L8P0C7I0 530 aa31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 FOSBP53539 338 aa31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 MYL10Q9BUA6 226 aa31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 FAM217BQ9NTX9 383 aaPredicted RBP31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 TNKSO95271 1327 aa31.09■■■□□ 2.57
SH3GL3-202ENST00000427482 PRDM1O75626 825 aa31.08■■■□□ 2.57
SH3GL3-202ENST00000427482 RCAN1P53805 252 aa31.08■■■□□ 2.57
SH3GL3-202ENST00000427482 CPLX2Q6PUV4 134 aaKnown RBP31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms