RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ZNF112Q9UJU3 913 aa12.48□□□□□ -0.41
COMMD1-202ENST00000427417 RCAN3Q9UKA8 241 aa12.48□□□□□ -0.41
COMMD1-202ENST00000427417 DDX19BQ9UMR2 479 aa12.48□□□□□ -0.41
COMMD1-202ENST00000427417 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
COMMD1-202ENST00000427417 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 INPP5BP32019 993 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 PI16Q6UXB8 463 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.47□□□□□ -0.41
COMMD1-202ENST00000427417 CD99L2Q8TCZ2 262 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 DBNDD2Q9BQY9 259 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
COMMD1-202ENST00000427417 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 IRF6O14896 467 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 HMMRO75330 724 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 BAG3O95817 575 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 PICALMQ13492 652 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 ARHGEF6Q15052 776 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
COMMD1-202ENST00000427417 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
COMMD1-202ENST00000427417 FBXO46Q6PJ61 603 aaPredicted RBP12.46□□□□□ -0.41
COMMD1-202ENST00000427417 RPAP2Q8IXW5 612 aaPredicted RBP12.46□□□□□ -0.41
COMMD1-202ENST00000427417 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
COMMD1-202ENST00000427417 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.42
COMMD1-202ENST00000427417 PLCG2P16885 1265 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 RHBDL3P58872 404 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 SP3Q02447 781 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
COMMD1-202ENST00000427417 OTOP1Q7RTM1 612 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
COMMD1-202ENST00000427417 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 DOCK2Q92608 1830 aa12.45□□□□□ -0.42
COMMD1-202ENST00000427417 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
COMMD1-202ENST00000427417 CYP2E1P05181 493 aaPredicted RBP12.44□□□□□ -0.42
COMMD1-202ENST00000427417 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
COMMD1-202ENST00000427417 SCYL3Q8IZE3 742 aa12.44□□□□□ -0.42
COMMD1-202ENST00000427417 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
COMMD1-202ENST00000427417 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
COMMD1-202ENST00000427417 DDX4Q9NQI0 724 aaKnown RBP12.44□□□□□ -0.42
COMMD1-202ENST00000427417 SNRKQ9NRH2 765 aa12.44□□□□□ -0.42
COMMD1-202ENST00000427417 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
COMMD1-202ENST00000427417 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
COMMD1-202ENST00000427417 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 DDTLA6NHG4 134 aaPredicted RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 PHF20L1A8MW92 1017 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 CXCL11O14625 94 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 TBC1D12O60347 775 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 ZAP70P43403 619 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 AACSQ86V21 672 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 CERS3Q8IU89 383 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 TEX11Q8IYF3 940 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 OSBPL5Q9H0X9 879 aaPredicted RBP12.43□□□□□ -0.42
COMMD1-202ENST00000427417 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
COMMD1-202ENST00000427417 TLR2O60603 784 aa12.42□□□□□ -0.42
COMMD1-202ENST00000427417 PPP4CP60510 307 aa12.42□□□□□ -0.42
COMMD1-202ENST00000427417 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
COMMD1-202ENST00000427417 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
COMMD1-202ENST00000427417 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
COMMD1-202ENST00000427417 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
COMMD1-202ENST00000427417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
COMMD1-202ENST00000427417 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
COMMD1-202ENST00000427417 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
COMMD1-202ENST00000427417 MAST2Q6P0Q8 1798 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 PTPRAP18433 802 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 KIF22Q14807 665 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 FASTKD5Q7L8L6 764 aaKnown RBP12.41□□□□□ -0.42
COMMD1-202ENST00000427417 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
COMMD1-202ENST00000427417 IL1RAPL2Q9NP60 686 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
COMMD1-202ENST00000427417 HERC5Q9UII4 1024 aaKnown RBP12.41□□□□□ -0.42
COMMD1-202ENST00000427417 MYO5AQ9Y4I1 1855 aaKnown RBP12.41□□□□□ -0.42
COMMD1-202ENST00000427417 ZHX2Q9Y6X8 837 aa12.41□□□□□ -0.42
COMMD1-202ENST00000427417 HTTP42858 3142 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PDHXO00330 501 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 IDH1O75874 414 aaKnown RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 IFIT2P09913 472 aaKnown RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 TTF1Q15361 905 aaPredicted RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PARK7Q99497 189 aaKnown RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PIH1D3Q9NQM4 214 aaKnown RBP12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
COMMD1-202ENST00000427417 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms