RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 ZCRB1Q8TBF4 217 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 ABCF2Q9UG63 623 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 IQUBQ8NA54 791 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 HPS3Q969F9 1004 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 DDX27Q96GQ7 796 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 RAB3IPQ96QF0 476 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 HNRNPH1P31943 449 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 MYO1EQ12965 1108 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CCDC40Q4G0X9 1142 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CACNA2D4Q7Z3S7 1137 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 ZMAT2Q96NC0 199 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 TYW1Q9NV66 732 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.83□□□□□ -1.96
NEB-209ENST00000427231 ATICP31939 592 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 COPB2P35606 906 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 APBB2Q92870 758 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 HAUS8Q9BT25 410 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TRIM62Q9BVG3 475 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 ADAMTS2O95450 1211 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 BRDTQ58F21 947 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 GJC2Q5T442 439 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 FBXW10Q5XX13 1052 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 FBXL16Q8N461 479 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 APOA4P06727 396 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 EIF3BP55884 814 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 SLFN5Q08AF3 891 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 RILPL1Q5EBL4 403 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 PPP1R21Q6ZMI0 780 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 OLFML3Q9NRN5 406 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CHCHD3Q9NX63 227 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 MAP3K20Q9NYL2 800 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 KIAA0391O15091 583 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 HNRNPRO43390 633 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 FERP16591 822 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CCDC92Q53HC0 331 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 SYCP3Q8IZU3 236 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 LRRC43Q8N309 656 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 FLCNQ8NFG4 579 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 GTF3C2Q8WUA4 911 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 BRF1Q92994 677 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CSRNP1Q96S65 589 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MAGEA9P43362 315 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CEBPAP49715 358 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 PDE4BQ07343 736 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 LAMB3Q13751 1172 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 HAUS3Q68CZ6 603 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 FOXR2Q6PJQ5 311 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 NRBP1Q9UHY1 535 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 ARAP1Q96P48 1450 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 IL15P40933 162 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 SLC8A3P57103 927 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SAFB2Q14151 953 aaKnown RBP eCLIP2.83□□□□□ -1.96
NEB-209ENST00000427231 TSNAXIP1Q2TAA8 658 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 DDX54Q8TDD1 881 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 SMIM23A6NLE4 172 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TUFMP49411 452 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 ELF2Q15723 593 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 EFHBQ8N7U6 833 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SAMM50Q9Y512 469 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SLU7O95391 586 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 IGHMBP2P38935 993 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 ZNF131P52739 623 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 GRM1Q13255 1194 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CHD1LQ86WJ1 897 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 RASAL2Q9UJF2 1139 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 ALCAMQ13740 583 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 GKAP1Q5VSY0 366 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 VPS33BQ9H267 617 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TTF2Q9UNY4 1162 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 RSPH10B2B2RC85 870 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 M0R3G1 203 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SNRPA1P09661 255 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 RSPH10BP0C881 870 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 USP6NLQ92738 828 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 SYCP2LQ5T4T6 812 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CYP26C1Q6V0L0 522 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TRIM50Q86XT4 487 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CACTINQ8WUQ7 758 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 FOXP3Q9BZS1 431 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 LUC7L3O95232 432 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 RFX1P22670 979 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 KRR1Q13601 381 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 KIF1CO43896 1103 aaKnown RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 GFAPP14136 432 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MUTP22033 750 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 CDC25CP30307 473 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MTUS1Q9ULD2 1270 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 STK38LQ9Y2H1 464 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 MUM1L1Q5H9M0 696 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 PNMA8AQ86V59 439 aaPredicted RBP2.83□□□□□ -1.96
NEB-209ENST00000427231 NEUROD6Q96NK8 337 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 TIPINQ9BVW5 301 aa2.83□□□□□ -1.96
NEB-209ENST00000427231 ANKRD33BA6NCL7 494 aa2.82□□□□□ -1.96
NEB-209ENST00000427231 CCT5P48643 541 aa2.82□□□□□ -1.96
NEB-209ENST00000427231 RAB15P59190 212 aa2.82□□□□□ -1.96
NEB-209ENST00000427231 EIF2B5Q13144 721 aaKnown RBP2.82□□□□□ -1.96
NEB-209ENST00000427231 TRADDQ15628 312 aa2.82□□□□□ -1.96
NEB-209ENST00000427231 OLFML2BQ68BL8 750 aa2.82□□□□□ -1.96
NEB-209ENST00000427231 LLGL2Q6P1M3 1020 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms