RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 PTPN18Q99952 460 aa20.3■□□□□ 0.84
SHANK2-207ENST00000425049 COG6Q9Y2V7 657 aa20.3■□□□□ 0.84
SHANK2-207ENST00000425049 RFX7Q2KHR2 1363 aa20.3■□□□□ 0.84
SHANK2-207ENST00000425049 PPATQ06203 517 aa20.29■□□□□ 0.84
SHANK2-207ENST00000425049 NAA16Q6N069 864 aaPredicted RBP20.29■□□□□ 0.84
SHANK2-207ENST00000425049 ZFPM1Q8IX07 1006 aa20.29■□□□□ 0.84
SHANK2-207ENST00000425049 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
SHANK2-207ENST00000425049 ZFYVE28Q9HCC9 887 aa20.29■□□□□ 0.84
SHANK2-207ENST00000425049 EXOC6BQ9Y2D4 811 aa20.29■□□□□ 0.84
SHANK2-207ENST00000425049 IRF6O14896 467 aa20.28■□□□□ 0.84
SHANK2-207ENST00000425049 ZNF512BQ96KM6 892 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-207ENST00000425049 CCDC8Q9H0W5 538 aaPredicted RBP20.28■□□□□ 0.84
SHANK2-207ENST00000425049 PICK1Q9NRD5 415 aa20.28■□□□□ 0.84
SHANK2-207ENST00000425049 ZNF112Q9UJU3 913 aa20.28■□□□□ 0.84
SHANK2-207ENST00000425049 DBNLQ9UJU6 430 aaKnown RBP20.28■□□□□ 0.84
SHANK2-207ENST00000425049 BAG3O95817 575 aa20.27■□□□□ 0.84
SHANK2-207ENST00000425049 NOL9Q5SY16 702 aaKnown RBP20.27■□□□□ 0.84
SHANK2-207ENST00000425049 FBXO46Q6PJ61 603 aaPredicted RBP20.27■□□□□ 0.84
SHANK2-207ENST00000425049 AACSQ86V21 672 aa20.27■□□□□ 0.84
SHANK2-207ENST00000425049 DDX4Q9NQI0 724 aaKnown RBP20.27■□□□□ 0.84
SHANK2-207ENST00000425049 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
SHANK2-207ENST00000425049 TRIM17Q9Y577 477 aa20.27■□□□□ 0.84
SHANK2-207ENST00000425049 DOCK2Q92608 1830 aa20.27■□□□□ 0.84
SHANK2-207ENST00000425049 PLCG2P16885 1265 aa20.26■□□□□ 0.83
SHANK2-207ENST00000425049 RHBDL3P58872 404 aa20.26■□□□□ 0.83
SHANK2-207ENST00000425049 RPAP2Q8IXW5 612 aaPredicted RBP20.26■□□□□ 0.83
SHANK2-207ENST00000425049 TEX11Q8IYF3 940 aa20.26■□□□□ 0.83
SHANK2-207ENST00000425049 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
SHANK2-207ENST00000425049 ZNF384Q8TF68 577 aa20.26■□□□□ 0.83
SHANK2-207ENST00000425049 EAF2Q96CJ1 260 aaPredicted RBP20.26■□□□□ 0.83
SHANK2-207ENST00000425049 ZCCHC17Q9NP64 241 aaKnown RBP20.26■□□□□ 0.83
SHANK2-207ENST00000425049 TLR7Q9NYK1 1049 aaKnown RBP20.26■□□□□ 0.83
SHANK2-207ENST00000425049 ATRNL1Q5VV63 1379 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 DDTLA6NHG4 134 aaPredicted RBP20.25■□□□□ 0.83
SHANK2-207ENST00000425049 IGSF3O75054 1194 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 NPM3O75607 178 aaKnown RBP20.25■□□□□ 0.83
SHANK2-207ENST00000425049 SP3Q02447 781 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 ARHGEF6Q15052 776 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 SCYL3Q8IZE3 742 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 MAST2Q6P0Q8 1798 aa20.25■□□□□ 0.83
SHANK2-207ENST00000425049 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
SHANK2-207ENST00000425049 ZAP70P43403 619 aa20.24■□□□□ 0.83
SHANK2-207ENST00000425049 MLLT1Q03111 559 aaPredicted RBP20.24■□□□□ 0.83
SHANK2-207ENST00000425049 SH3BP5LQ7L8J4 393 aa20.24■□□□□ 0.83
SHANK2-207ENST00000425049 CD99L2Q8TCZ2 262 aa20.24■□□□□ 0.83
SHANK2-207ENST00000425049 ZBTB40Q9NUA8 1239 aa20.24■□□□□ 0.83
SHANK2-207ENST00000425049 AATFQ9NY61 560 aaKnown RBP eCLIP20.24■□□□□ 0.83
SHANK2-207ENST00000425049 BTBD19C9JJ37 291 aa20.23■□□□□ 0.83
SHANK2-207ENST00000425049 APBB1O00213 710 aa20.23■□□□□ 0.83
SHANK2-207ENST00000425049 SOX10P56693 466 aa20.23■□□□□ 0.83
SHANK2-207ENST00000425049 CLASRPQ8N2M8 674 aaKnown RBP20.23■□□□□ 0.83
SHANK2-207ENST00000425049 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
SHANK2-207ENST00000425049 IL1RAPL2Q9NP60 686 aa20.23■□□□□ 0.83
SHANK2-207ENST00000425049 IDH1O75874 414 aaKnown RBP20.22■□□□□ 0.83
SHANK2-207ENST00000425049 PDE3AQ14432 1141 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 SH3RF3Q8TEJ3 882 aaPredicted RBP20.22■□□□□ 0.83
SHANK2-207ENST00000425049 OSBPL5Q9H0X9 879 aaPredicted RBP20.22■□□□□ 0.83
SHANK2-207ENST00000425049 BCL11AQ9H165 835 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 EFCC1Q9HA90 598 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.831e-6■■■■■ 27.7
SHANK2-207ENST00000425049 PIH1D3Q9NQM4 214 aaKnown RBP20.22■□□□□ 0.83
SHANK2-207ENST00000425049 KCNH4Q9UQ05 1017 aa20.22■□□□□ 0.83
SHANK2-207ENST00000425049 COL2A1P02458 1487 aaPredicted RBP20.22■□□□□ 0.83
SHANK2-207ENST00000425049 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
SHANK2-207ENST00000425049 CTNND1O60716 968 aaKnown RBP20.21■□□□□ 0.83
SHANK2-207ENST00000425049 RGS19P49795 217 aa20.21■□□□□ 0.83
SHANK2-207ENST00000425049 KIF22Q14807 665 aa20.21■□□□□ 0.83
SHANK2-207ENST00000425049 ANKRD23Q86SG2 305 aa20.21■□□□□ 0.83
SHANK2-207ENST00000425049 ZHX2Q9Y6X8 837 aa20.21■□□□□ 0.83
SHANK2-207ENST00000425049 CXCL11O14625 94 aa20.2■□□□□ 0.82
SHANK2-207ENST00000425049 TBC1D12O60347 775 aa20.2■□□□□ 0.82
SHANK2-207ENST00000425049 TLR2O60603 784 aa20.2■□□□□ 0.82
SHANK2-207ENST00000425049 IFIT2P09913 472 aaKnown RBP20.2■□□□□ 0.82
SHANK2-207ENST00000425049 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
SHANK2-207ENST00000425049 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
SHANK2-207ENST00000425049 PDHXO00330 501 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 RAB11FIP3O75154 756 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 PTPRAP18433 802 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 CYP7A1P22680 504 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 MAP3K10Q02779 954 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
SHANK2-207ENST00000425049 PARK7Q99497 189 aaKnown RBP20.19■□□□□ 0.82
SHANK2-207ENST00000425049 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
SHANK2-207ENST00000425049 PPP4CP60510 307 aa20.18■□□□□ 0.82
SHANK2-207ENST00000425049 FASTKD5Q7L8L6 764 aaKnown RBP20.18■□□□□ 0.82
SHANK2-207ENST00000425049 MAPKAPK5Q8IW41 473 aa20.18■□□□□ 0.82
SHANK2-207ENST00000425049 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
SHANK2-207ENST00000425049 HERC5Q9UII4 1024 aaKnown RBP20.18■□□□□ 0.82
SHANK2-207ENST00000425049 FAM196BA6NMK8 535 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 TTF1Q15361 905 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-207ENST00000425049 TMED8Q6PL24 325 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-207ENST00000425049 ADGRA1Q86SQ6 560 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
SHANK2-207ENST00000425049 MAGEB6Q8N7X4 407 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 PI4KBQ9UBF8 816 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 NDUFB9Q9Y6M9 179 aa20.17■□□□□ 0.82
SHANK2-207ENST00000425049 FLT1P17948 1338 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms