RNA–Protein interactions for RNA: ENST00000424998.3

CNKSR3-201, Transcript of CNKSR family member 3, humanhuman

TSL 5

Gene CNKSR3, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-201ENST00000424998 TMEM63CQ9P1W3 806 aa4.94□□□□□ -1.62
CNKSR3-201ENST00000424998 THRAP3Q9Y2W1 955 aaKnown RBP4.94□□□□□ -1.62
CNKSR3-201ENST00000424998 ACEP12821 1306 aa4.94□□□□□ -1.62
CNKSR3-201ENST00000424998 COL18A1P39060 1754 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 RGPD5Q99666 1765 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 BCL9O00512 1426 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 EFSO43281 561 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 TNFRSF21O75509 655 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 GCP02774 474 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 LDHBP07195 334 aaKnown RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 BMP4P12644 408 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 USP6P35125 1406 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 TAGLNQ01995 201 aaKnown RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 LAMC2Q13753 1193 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 PDE12Q6L8Q7 609 aaKnown RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 AMIGO3Q86WK7 504 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 ARHGEF28Q8N1W1 1705 aaKnown RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 SNX29Q8TEQ0 813 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 CSRNP1Q96S65 589 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 SLC30A3Q99726 388 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 CFHR5Q9BXR6 569 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 BCL11AQ9H165 835 aa4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 ABI2Q9NYB9 513 aaPredicted RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.93□□□□□ -1.62
CNKSR3-201ENST00000424998 BRD4O60885 1362 aaPredicted RBP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 ANKRD30BQ9BXX2 1392 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 PHF20L1A8MW92 1017 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 EIF1AYO14602 144 aaKnown RBP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 CPNE3O75131 537 aaKnown RBP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 MX2P20592 715 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 CTBSQ01459 385 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 FMR1Q06787 632 aaKnown RBP eCLIP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 DSC3Q14574 896 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 COL23A1Q86Y22 540 aaPredicted RBP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 ALKBH8Q96BT7 664 aaKnown RBP4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 SETDB2Q96T68 719 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 GSX2Q9BZM3 304 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 NDFIP2Q9NV92 336 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 TFCP2L1Q9NZI6 479 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 KANSL3Q9P2N6 904 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 WDR17Q8IZU2 1322 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 IGSF1Q8N6C5 1336 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 ITSN1Q15811 1721 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 QSER1Q2KHR3 1735 aa4.92□□□□□ -1.62
CNKSR3-201ENST00000424998 MMP20O60882 483 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 TOMM70O94826 608 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 EGFRP00533 1210 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 POLR3DP05423 398 aaPredicted RBP4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 PSAPP07602 524 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 CES1P23141 567 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 USPL1Q5W0Q7 1092 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 XKR5Q6UX68 686 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 C1orf127Q8N9H9 656 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 SLC16A10Q8TF71 515 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 CNTN3Q9P232 1028 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 SLIT3O75094 1523 aa4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 POLR3AO14802 1390 aaPredicted RBP4.91□□□□□ -1.62
CNKSR3-201ENST00000424998 PPIP5K1Q6PFW1 1433 aa4.9□□□□□ -1.62
CNKSR3-201ENST00000424998 PIK3C2AO00443 1686 aa4.9□□□□□ -1.62
CNKSR3-201ENST00000424998 RBM47A0AV96 593 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 EREGO14944 169 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 GADD45BO75293 160 aaPredicted RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 IGHA2P01877 340 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 CYP2E1P05181 493 aaPredicted RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 PCBP4P57723 403 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 MLLT1Q03111 559 aaPredicted RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 COL19A1Q14993 1142 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 ENOX2Q16206 610 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 ALG1LQ6GMV1 187 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 FBXO33Q7Z6M2 555 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 SYT9Q86SS6 491 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 NCAPG2Q86XI2 1143 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 NANOS1Q8WY41 292 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 NSUN5Q96P11 429 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 DUSP9Q99956 384 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 CDK19Q9BWU1 502 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 UBE2OQ9C0C9 1292 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 ZFYVE28Q9HCC9 887 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 MRS2Q9HD23 443 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 C11orf16Q9NQ32 467 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 ZFATQ9P243 1243 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 HCN2Q9UL51 889 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 NSFL1CQ9UNZ2 370 aaKnown RBP4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 ABCC6O95255 1503 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 KCPQ6ZWJ8 1503 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 KAT6BQ8WYB5 2073 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 NSD2O96028 1365 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 TRPM1Q7Z4N2 1603 aa4.9□□□□□ -1.63
CNKSR3-201ENST00000424998 CPSF1Q10570 1443 aaKnown RBP4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 TOGARAM1Q9Y4F4 1720 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 E9PSI1 815 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 H3BM21 787 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 EXOC5O00471 708 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 TERTO14746 1132 aaKnown RBP4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 PRPF40AO75400 957 aaKnown RBP4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 FGD1P98174 961 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 HFE2Q6ZVN8 426 aa4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 DHX32Q7L7V1 743 aaKnown RBP4.89□□□□□ -1.63
CNKSR3-201ENST00000424998 GPR161Q8N6U8 529 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms