RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MORC4Q8TE76 937 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 SEMA6CQ9H3T2 930 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 GSX1Q9H4S2 264 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-205ENST00000424674 ACSS3Q9H6R3 686 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 FAM105AQ9NUU6 356 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 MAGEC2Q9UBF1 373 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-205ENST00000424674 DCTN4Q9UJW0 460 aa5.06□□□□□ -1.6
SF3B1-205ENST00000424674 SYNGAP1Q96PV0 1343 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 ANKRD33BA6NCL7 494 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 NFICP08651 508 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 ASPAP45381 313 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 IGBP1P78318 339 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 HNRNPUQ00839 825 aaKnown RBP eCLIP5.05□□□□□ -1.6
SF3B1-205ENST00000424674 FAAP100Q0VG06 881 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 ZNF662Q6ZS27 426 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 GATA6Q92908 595 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 NLRP2Q9NX02 1062 aa5.05□□□□□ -1.6
SF3B1-205ENST00000424674 GPN3Q9UHW5 284 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-205ENST00000424674 ANGEL1Q9UNK9 670 aaKnown RBP5.05□□□□□ -1.6
SF3B1-205ENST00000424674 hCG_2014768A0A024R1R8 64 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 TLDC2A0PJX2 215 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 FAM170BA6NMN3 283 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 TMPRSS2O15393 492 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 CYP26A1O43174 497 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 IBSPP21815 317 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-205ENST00000424674 ZNF157P51786 506 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-205ENST00000424674 FCGRTP55899 365 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 PI16Q6UXB8 463 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 SETDB2Q96T68 719 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 KRT82Q9NSB4 513 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 DAGLAQ9Y4D2 1042 aa5.04□□□□□ -1.6
SF3B1-205ENST00000424674 PNMA6FA0A0J9YX94 578 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 MAFGO15525 162 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 PAX4O43316 350 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 PRNPP04156 253 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 XRCC5P13010 732 aaKnown RBP5.03□□□□□ -1.6
SF3B1-205ENST00000424674 LIG1P18858 919 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 IRX6P78412 446 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-205ENST00000424674 CYP27A1Q02318 531 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 PPP2R3AQ06190 1150 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 HSP90AB2PQ58FF8 381 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 BCO2Q9BYV7 579 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 TANGO6Q9C0B7 1094 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 LNPKQ9C0E8 428 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 CCDC86Q9H6F5 360 aaKnown RBP5.03□□□□□ -1.6
SF3B1-205ENST00000424674 PPP4R2Q9NY27 417 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 CCDC39Q9UFE4 941 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
SF3B1-205ENST00000424674 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B1-205ENST00000424674 TREHO43280 583 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 GSTP1P09211 210 aaKnown RBP5.02□□□□□ -1.61
SF3B1-205ENST00000424674 TAL1P17542 331 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-205ENST00000424674 PTMSP20962 102 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 PLCB3Q01970 1234 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ID3Q02535 119 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 DSC3Q14574 896 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ENOX2Q16206 610 aaKnown RBP5.02□□□□□ -1.61
SF3B1-205ENST00000424674 PTPROQ16827 1216 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 TSNAXIP1Q2TAA8 658 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 DUSP27Q5VZP5 1158 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 SDE2Q6IQ49 451 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 SEZ6L2Q6UXD5 910 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ZNF765Q7L2R6 523 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ZCRB1Q8TBF4 217 aaKnown RBP5.02□□□□□ -1.61
SF3B1-205ENST00000424674 KCNB2Q92953 911 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 BRINP2Q9C0B6 783 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ZC3H12CQ9C0D7 883 aaKnown RBP5.02□□□□□ -1.61
SF3B1-205ENST00000424674 ATXN3LQ9H3M9 355 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 PIDD1Q9HB75 910 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 C1GALT1Q9NS00 363 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 TMEM39AQ9NV64 488 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 CRIM1Q9NZV1 1036 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 WWC3Q9ULE0 1092 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 SBNO2Q9Y2G9 1366 aa5.02□□□□□ -1.61
SF3B1-205ENST00000424674 SCAMP3O14828 347 aaKnown RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 DYNC1LI2O43237 492 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 ZNF862O60290 1169 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 EIF3JO75822 258 aaKnown RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 SLFN14P0C7P3 912 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 MAPK8P45983 427 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 ANAPC15P60006 121 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 KIF4BQ2VIQ3 1234 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 EGFLAMQ63HQ2 1017 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 FBXO33Q7Z6M2 555 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 PDZD3Q86UT5 571 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 SULF2Q8IWU5 870 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 ABI1Q8IZP0 508 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 WDR89Q96FK6 387 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 FANCD2OSQ96PS1 177 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 DNAJC2Q99543 621 aaKnown RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 LRRC4CQ9HCJ2 640 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 BSDC1Q9NW68 430 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-205ENST00000424674 ADGRE2Q9UHX3 823 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 PCDHGC5Q9Y5F6 944 aa5.01□□□□□ -1.61
SF3B1-205ENST00000424674 COL19A1Q14993 1142 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms