RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 RIOK1Q9BRS2 568 aaKnown RBP30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 RFX7Q2KHR2 1363 aa30.61■■■□□ 2.49
TSPAN3-203ENST00000424443 TLL2Q9Y6L7 1015 aa30.6■■■□□ 2.49
TSPAN3-203ENST00000424443 MBD4O95243 580 aa30.59■■■□□ 2.49
TSPAN3-203ENST00000424443 MAPKAPK5Q8IW41 473 aa30.59■■■□□ 2.49
TSPAN3-203ENST00000424443 ZFPM1Q8IX07 1006 aa30.59■■■□□ 2.49
TSPAN3-203ENST00000424443 HUNKP57058 714 aa30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 TTC22Q5TAA0 569 aa30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 SAPCD2Q86UD0 394 aa30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 CDAN1Q8IWY9 1227 aa30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 PUS7LQ9H0K6 701 aaKnown RBP30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 OSBPL5Q9H0X9 879 aaPredicted RBP30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 ARMT1Q9H993 441 aa30.58■■■□□ 2.49
TSPAN3-203ENST00000424443 LCORLQ8N3X6 602 aa30.57■■■□□ 2.49
TSPAN3-203ENST00000424443 CSRNP1Q96S65 589 aa30.57■■■□□ 2.49
TSPAN3-203ENST00000424443 ANGEL1Q9UNK9 670 aaKnown RBP30.57■■■□□ 2.49
TSPAN3-203ENST00000424443 PAPPA2Q9BXP8 1791 aa30.57■■■□□ 2.48
TSPAN3-203ENST00000424443 FLT1P17948 1338 aa30.57■■■□□ 2.48
TSPAN3-203ENST00000424443 DCAF15Q66K64 600 aa30.57■■■□□ 2.48
TSPAN3-203ENST00000424443 TICAM2Q86XR7 235 aa30.57■■■□□ 2.48
TSPAN3-203ENST00000424443 IREB2P48200 963 aaKnown RBP30.56■■■□□ 2.48
TSPAN3-203ENST00000424443 PAXIP1Q6ZW49 1069 aaPredicted RBP30.56■■■□□ 2.48
TSPAN3-203ENST00000424443 SSC5DA1L4H1 1573 aa30.55■■■□□ 2.48
TSPAN3-203ENST00000424443 DEFB115Q30KQ5 88 aa30.55■■■□□ 2.48
TSPAN3-203ENST00000424443 MOB2Q70IA6 237 aa30.55■■■□□ 2.48
TSPAN3-203ENST00000424443 OSBP2Q969R2 916 aa30.55■■■□□ 2.48
TSPAN3-203ENST00000424443 DHX36Q9H2U1 1008 aaKnown RBP30.55■■■□□ 2.48
TSPAN3-203ENST00000424443 DDTLA6NHG4 134 aaPredicted RBP30.54■■■□□ 2.48
TSPAN3-203ENST00000424443 FZD1Q9UP38 647 aa30.54■■■□□ 2.48
TSPAN3-203ENST00000424443 CDK5RAP2Q96SN8 1893 aa30.54■■■□□ 2.48
TSPAN3-203ENST00000424443 UBE2Q2LH0YL09 131 aa30.53■■■□□ 2.48
TSPAN3-203ENST00000424443 DDRGK1Q96HY6 314 aa30.53■■■□□ 2.48
TSPAN3-203ENST00000424443 FOCADQ5VW36 1801 aa30.53■■■□□ 2.48
TSPAN3-203ENST00000424443 ZMYM1Q5SVZ6 1142 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 MIGA2Q7L4E1 593 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 SH3BP5LQ7L8J4 393 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 MKRN1Q9UHC7 482 aaKnown RBP30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 SLC4A4Q9Y6R1 1079 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 ATRNL1Q5VV63 1379 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 COL2A1P02458 1487 aaPredicted RBP30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 RASSF10A6NK89 507 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 GSPT1P15170 499 aaKnown RBP30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 SDR42E1Q8WUS8 393 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 HHIPL1Q96JK4 782 aa30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 SAP30BPQ9UHR5 308 aaKnown RBP30.52■■■□□ 2.48
TSPAN3-203ENST00000424443 HIP1O00291 1037 aa30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 GPAA1O43292 621 aa30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 USP2O75604 605 aaPredicted RBP30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 HLA-DOAP06340 250 aa30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 ZNF341Q9BYN7 854 aa30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 ATP8A2Q9NTI2 1148 aa30.51■■■□□ 2.47
TSPAN3-203ENST00000424443 M0R2C6 588 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 SDSP20132 328 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 MAP3K11Q16584 847 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 STRBPQ96SI9 672 aaKnown RBP30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 SEC62Q99442 399 aaKnown RBP30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 DIAPH3Q9NSV4 1193 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 PI4KBQ9UBF8 816 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 PALD1Q9ULE6 856 aa30.5■■■□□ 2.47
TSPAN3-203ENST00000424443 GNAT2P19087 354 aa30.49■■■□□ 2.47
TSPAN3-203ENST00000424443 RGMBQ6NW40 437 aa30.49■■■□□ 2.47
TSPAN3-203ENST00000424443 TRIM34Q9BYJ4 488 aa30.49■■■□□ 2.47
TSPAN3-203ENST00000424443 HELLSQ9NRZ9 838 aa30.49■■■□□ 2.47
TSPAN3-203ENST00000424443 PRKAB2O43741 272 aa30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 ZNF157P51786 506 aaPredicted RBP30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 GRM1Q13255 1194 aa30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 SKAP1Q86WV1 359 aa30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 ANKRD13AQ8IZ07 590 aa30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 DCP1AQ9NPI6 582 aaPredicted RBP30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 MCM9Q9NXL9 1143 aa30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.48■■■□□ 2.47
TSPAN3-203ENST00000424443 POLR3DP05423 398 aaPredicted RBP30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 ECE1P42892 770 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 TTC6Q86TZ1 520 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 AMOTL1Q8IY63 956 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 WRNIP1Q96S55 665 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 MYH1P12882 1939 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 UNCXA6NJT0 531 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 SLC4A8Q2Y0W8 1093 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 CRACR2BQ8N4Y2 399 aaPredicted RBP30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 KLRG1Q96E93 195 aa30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.47■■■□□ 2.47
TSPAN3-203ENST00000424443 APPP05067 770 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 MAP3K9P80192 1104 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 NMIQ13287 307 aaPredicted RBP30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 MCMDC2Q4G0Z9 681 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 LDLRAD1Q5T700 205 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 CYP4F22Q6NT55 531 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 FAM227BQ96M60 508 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 CSADQ9Y600 493 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 NAV1Q8NEY1 1877 aa30.46■■■□□ 2.47
TSPAN3-203ENST00000424443 SLC10A4Q96EP9 437 aa30.45■■■□□ 2.47
TSPAN3-203ENST00000424443 HERC5Q9UII4 1024 aaKnown RBP30.45■■■□□ 2.47
TSPAN3-203ENST00000424443 TBC1D12O60347 775 aa30.44■■■□□ 2.46
TSPAN3-203ENST00000424443 FOXP4Q8IVH2 680 aaPredicted RBP30.44■■■□□ 2.46
TSPAN3-203ENST00000424443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.44■■■□□ 2.46
TSPAN3-203ENST00000424443 CCDC102AQ96A19 550 aa30.44■■■□□ 2.46
TSPAN3-203ENST00000424443 CAPNS2Q96L46 248 aa30.44■■■□□ 2.46
TSPAN3-203ENST00000424443 A0A0D9SFI3 127 aa30.43■■■□□ 2.46
TSPAN3-203ENST00000424443 MFAP1P55081 439 aaKnown RBP30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms