RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 ANAPC4Q9UJX5 808 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
SNX20-203ENST00000423026 RXRBP28702 533 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
SNX20-203ENST00000423026 DYNLL1P63167 89 aaKnown RBP10.54□□□□□ -0.72
SNX20-203ENST00000423026 TPRNQ4KMQ1 711 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 ATL3Q6DD88 541 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 FAM173BQ6P4H8 233 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 TMC4Q7Z404 712 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 TXNRD3Q86VQ6 643 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 TFIP11Q9UBB9 837 aaKnown RBP10.54□□□□□ -0.72
SNX20-203ENST00000423026 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
SNX20-203ENST00000423026 LDHBP07195 334 aaKnown RBP10.53□□□□□ -0.72
SNX20-203ENST00000423026 PCP11498 1178 aaKnown RBP10.53□□□□□ -0.72
SNX20-203ENST00000423026 FOSBP53539 338 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 GSTO1P78417 241 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 DDR1Q08345 913 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 WTAPQ15007 396 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 APOA5Q6Q788 366 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 TTC6Q86TZ1 520 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
SNX20-203ENST00000423026 ESR2Q92731 530 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 ZNF396Q96N95 335 aaPredicted RBP10.53□□□□□ -0.72
SNX20-203ENST00000423026 UBAC1Q9BSL1 405 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 LY9Q9HBG7 655 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 INCENPQ9NQS7 918 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 UFL1O94874 794 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 SLC3A2P08195 630 aaKnown RBP10.53□□□□□ -0.72
SNX20-203ENST00000423026 PRDX5P30044 214 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 GPSM2P81274 684 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 MICU3Q86XE3 530 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 ATP8A2Q9NTI2 1148 aa10.53□□□□□ -0.72
SNX20-203ENST00000423026 AATFQ9NY61 560 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNX20-203ENST00000423026 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 GOLGA8AA7E2F4 631 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 ZNF500O60304 480 aaPredicted RBP10.52□□□□□ -0.72
SNX20-203ENST00000423026 LDHCP07864 332 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.72
SNX20-203ENST00000423026 SMAP1Q8IYB5 467 aaPredicted RBP10.52□□□□□ -0.72
SNX20-203ENST00000423026 STK11IPQ8N1F8 1099 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 ZNF384Q8TF68 577 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 LEO1Q8WVC0 666 aaPredicted RBP10.52□□□□□ -0.72
SNX20-203ENST00000423026 NOL10Q9BSC4 688 aaKnown RBP10.52□□□□□ -0.72
SNX20-203ENST00000423026 TSPY26PQ9H489 355 aa10.52□□□□□ -0.72
SNX20-203ENST00000423026 BAZ2AQ9UIF9 1905 aaKnown RBP10.52□□□□□ -0.73
SNX20-203ENST00000423026 MYH15Q9Y2K3 1946 aa10.52□□□□□ -0.73
SNX20-203ENST00000423026 KLRG2A4D1S0 409 aaPredicted RBP10.52□□□□□ -0.73
SNX20-203ENST00000423026 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
SNX20-203ENST00000423026 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
SNX20-203ENST00000423026 GUCY1B3Q02153 619 aa10.52□□□□□ -0.73
SNX20-203ENST00000423026 COL23A1Q86Y22 540 aaPredicted RBP10.52□□□□□ -0.73
SNX20-203ENST00000423026 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
SNX20-203ENST00000423026 JAG2Q9Y219 1238 aa10.52□□□□□ -0.73
SNX20-203ENST00000423026 EP400Q96L91 3159 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 CCDC196A0A1B0GTZ2 297 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 BAG3O95817 575 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 IARSP41252 1262 aaKnown RBP10.51□□□□□ -0.73
SNX20-203ENST00000423026 ZNF827Q17R98 1081 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 FBXO18Q8NFZ0 1043 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 NKX2-3Q8TAU0 364 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 TMX4Q9H1E5 349 aaPredicted RBP10.51□□□□□ -0.73
SNX20-203ENST00000423026 CD209Q9NNX6 404 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 TACC3Q9Y6A5 838 aa10.51□□□□□ -0.73
SNX20-203ENST00000423026 USP17L12C9JPN9 530 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 USP17L21D6R901 530 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 C6orf229H3BNL8 230 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 TRIM29Q14134 588 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 CTR9Q6PD62 1173 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 SP8Q8IXZ3 490 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 WASF1Q92558 559 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 ZKSCAN3Q9BRR0 538 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 RBSNQ9H1K0 784 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 SENP2Q9HC62 589 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 ARPP21Q9UBL0 812 aaPredicted RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 NOL7Q9UMY1 257 aaKnown RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 DYNC1I1O14576 645 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 RANBP6O60518 1105 aaKnown RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 RXRAP19793 462 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 PDE6BP35913 854 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 RCAN1P53805 252 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 RTN1Q16799 776 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 BRAPQ7Z569 592 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 AMOTL1Q8IY63 956 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 ALG1Q9BT22 464 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 DCP1AQ9NPI6 582 aaPredicted RBP10.5□□□□□ -0.73
SNX20-203ENST00000423026 MYH2Q9UKX2 1941 aa10.5□□□□□ -0.73
SNX20-203ENST00000423026 KIAA1551Q9HCM1 1747 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms