RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 LRRCC1Q9C099 1032 aa17■□□□□ 0.31
CNBP-201ENST00000422453 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
CNBP-201ENST00000422453 RHBDL3P58872 404 aa16.99■□□□□ 0.31
CNBP-201ENST00000422453 ZKSCAN4Q969J2 545 aaPredicted RBP16.99■□□□□ 0.31
CNBP-201ENST00000422453 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
CNBP-201ENST00000422453 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNBP-201ENST00000422453 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
CNBP-201ENST00000422453 GJA5P36382 358 aa16.98■□□□□ 0.31
CNBP-201ENST00000422453 MAP3K12Q12852 859 aa16.98■□□□□ 0.31
CNBP-201ENST00000422453 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
CNBP-201ENST00000422453 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
CNBP-201ENST00000422453 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
CNBP-201ENST00000422453 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
CNBP-201ENST00000422453 CYP7A1P22680 504 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 ERO1BQ86YB8 467 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 IFNL1Q8IU54 200 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 SNCAIPQ9Y6H5 919 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 INPP5BP32019 993 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 GTF2A2P52657 109 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
CNBP-201ENST00000422453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNBP-201ENST00000422453 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
CNBP-201ENST00000422453 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
CNBP-201ENST00000422453 OTOFQ9HC10 1997 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 RFX7Q2KHR2 1363 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 DDTLA6NHG4 134 aaPredicted RBP16.96■□□□□ 0.31
CNBP-201ENST00000422453 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 ZNF112Q9UJU3 913 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 CASP8AP2Q9UKL3 1982 aa16.96■□□□□ 0.31
CNBP-201ENST00000422453 PPP4CP60510 307 aa16.95■□□□□ 0.3
CNBP-201ENST00000422453 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
CNBP-201ENST00000422453 SH3BP5LQ7L8J4 393 aa16.95■□□□□ 0.3
CNBP-201ENST00000422453 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
CNBP-201ENST00000422453 OSBPL5Q9H0X9 879 aaPredicted RBP16.95■□□□□ 0.3
CNBP-201ENST00000422453 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
CNBP-201ENST00000422453 CCL15-CCL14A0A0B4J2E2 113 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 GOLIM4O00461 696 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
CNBP-201ENST00000422453 CAPN15O75808 1086 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 PPATQ06203 517 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 CCL15Q16663 113 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 CRBNQ96SW2 442 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 PICK1Q9NRD5 415 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 TESPA1A2RU30 521 aaPredicted RBP16.94■□□□□ 0.3
CNBP-201ENST00000422453 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNBP-201ENST00000422453 PPIL2Q13356 520 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 SNAPC2Q13487 334 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 BOLA2Q9H3K6 86 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
CNBP-201ENST00000422453 GPR25O00155 361 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 IRF6O14896 467 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 CETPP11597 493 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 ATP5JP18859 108 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 DGKZQ13574 1117 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 NOL9Q5SY16 702 aaKnown RBP16.93■□□□□ 0.3
CNBP-201ENST00000422453 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 MS4A4AQ96JQ5 239 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 CFHR5Q9BXR6 569 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 DHX36Q9H2U1 1008 aaKnown RBP16.93■□□□□ 0.3
CNBP-201ENST00000422453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.32e-7■■□□□ 13
CNBP-201ENST00000422453 ATRNL1Q5VV63 1379 aa16.93■□□□□ 0.3
CNBP-201ENST00000422453 DYNLL1P63167 89 aaKnown RBP16.92■□□□□ 0.3
CNBP-201ENST00000422453 SLC9C2Q5TAH2 1124 aa16.92■□□□□ 0.3
CNBP-201ENST00000422453 PAG1Q9NWQ8 432 aa16.92■□□□□ 0.3
CNBP-201ENST00000422453 DOCK2Q92608 1830 aa16.92■□□□□ 0.3
CNBP-201ENST00000422453 MYO5AQ9Y4I1 1855 aaKnown RBP16.92■□□□□ 0.3
CNBP-201ENST00000422453 PHF20L1A8MW92 1017 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 TBC1D12O60347 775 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 USP5P45974 858 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
CNBP-201ENST00000422453 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 ZNF296Q8WUU4 475 aaPredicted RBP16.91■□□□□ 0.3
CNBP-201ENST00000422453 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 PTPN18Q99952 460 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 TRIM34Q9BYJ4 488 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 PI4KBQ9UBF8 816 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
CNBP-201ENST00000422453 CTNND1O60716 968 aaKnown RBP16.91■□□□□ 0.3
CNBP-201ENST00000422453 FKTNO75072 461 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 HAUS7Q99871 368 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 MCOLN1Q9GZU1 580 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 FLT1P17948 1338 aa16.91■□□□□ 0.3
CNBP-201ENST00000422453 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
CNBP-201ENST00000422453 PDE6AP16499 860 aa16.9■□□□□ 0.3
CNBP-201ENST00000422453 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.3
CNBP-201ENST00000422453 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
CNBP-201ENST00000422453 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
CNBP-201ENST00000422453 HERC5Q9UII4 1024 aaKnown RBP16.9■□□□□ 0.3
CNBP-201ENST00000422453 MAGEB6P1A0A0J9YX57 407 aa16.89■□□□□ 0.29
CNBP-201ENST00000422453 HLA-DOAP06340 250 aa16.89■□□□□ 0.29
CNBP-201ENST00000422453 CRHR2Q13324 411 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms