RNA–Protein interactions for RNA: ENST00000422395.1

CCR9-204, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-204ENST00000422395 MNS1Q8NEH6 495 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 GPATCH3Q96I76 525 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 NUDT12Q9BQG2 462 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 STK31Q9BXU1 1019 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 UPF3BQ9BZI7 483 aaKnown RBP8.05□□□□□ -1.12
CCR9-204ENST00000422395 BABAM1Q9NWV8 329 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 PPP1R1BQ9UD71 204 aaPredicted RBP8.05□□□□□ -1.12
CCR9-204ENST00000422395 MKRN1Q9UHC7 482 aaKnown RBP8.05□□□□□ -1.12
CCR9-204ENST00000422395 DNAI1Q9UI46 699 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCR9-204ENST00000422395 FHOD1Q9Y613 1164 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 BTAF1O14981 1849 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 TNS2Q63HR2 1409 aa8.05□□□□□ -1.12
CCR9-204ENST00000422395 VPS37CA5D8V6 355 aaPredicted RBP8.04□□□□□ -1.12
CCR9-204ENST00000422395 ERICH4A6NGS2 130 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 CCDC69A6NI79 296 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 ZSCAN12O43309 604 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 RPS6KA5O75582 802 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 LRMPQ12912 555 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 RUFY3Q7L099 469 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
CCR9-204ENST00000422395 FBXO18Q8NFZ0 1043 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 MEIS3Q99687 375 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 UTP14AQ9BVJ6 771 aaKnown RBP8.04□□□□□ -1.12
CCR9-204ENST00000422395 CARD10Q9BWT7 1032 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 UBXN6Q9BZV1 441 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 LSG1Q9H089 658 aaKnown RBP8.04□□□□□ -1.12
CCR9-204ENST00000422395 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 SPON1Q9HCB6 807 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 FAM217BQ9NTX9 383 aaPredicted RBP8.04□□□□□ -1.12
CCR9-204ENST00000422395 DACT1Q9NYF0 836 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 BCL9O00512 1426 aa8.04□□□□□ -1.12
CCR9-204ENST00000422395 CLGNO14967 610 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 PLSCR1O15162 318 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 CBFA2T2O43439 604 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 GLRX3O76003 335 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 VEGFBP49765 207 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 GTF2A1P52655 376 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 KRT32Q14532 448 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 IQCB1Q15051 598 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ZRSR1Q15695 479 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 ZSCAN26Q16670 478 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 LRRFIP1Q32MZ4 808 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ICE2Q659A1 982 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
CCR9-204ENST00000422395 MARCH10Q8NA82 808 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 BICD2Q8TD16 824 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 CHAMP1Q96JM3 812 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 MPHOSPH8Q99549 860 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 TACO1Q9BSH4 297 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 HMG20BQ9P0W2 317 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 LRRFIP2Q9Y608 721 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 HOXA2O43364 376 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 KCNQ2O43526 872 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 CASTP20810 708 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 SFPQP23246 707 aaKnown RBP eCLIP8.03□□□□□ -1.12
CCR9-204ENST00000422395 USP8P40818 1118 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 MMP14P50281 582 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ETF1P62495 437 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 CCZ1BP86790 482 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 CCZ1P86791 482 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 BRD3Q15059 726 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 FOXD4L6Q3SYB3 417 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 ARHGAP29Q52LW3 1261 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 FOXD4L3Q6VB84 417 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 CCDC73Q6ZRK6 1079 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 PTF1AQ7RTS3 328 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 LEO1Q8WVC0 666 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 PPM1EQ8WY54 764 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 HLA-CQ95604 372 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ZNF396Q96N95 335 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 MYCBPQ99417 103 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 GBP3Q9H0R5 595 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 DEF6Q9H4E7 631 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ARFGAP3Q9NP61 516 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ZNF446Q9NWS9 450 aa8.03□□□□□ -1.12
CCR9-204ENST00000422395 ORC3Q9UBD5 711 aaPredicted RBP8.03□□□□□ -1.12
CCR9-204ENST00000422395 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.12
CCR9-204ENST00000422395 CHD4Q14839 1912 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 MYO1CO00159 1063 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 EXOC5O00471 708 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 ELL2O00472 640 aaPredicted RBP8.02□□□□□ -1.13
CCR9-204ENST00000422395 KINO60870 393 aaKnown RBP8.02□□□□□ -1.13
CCR9-204ENST00000422395 ERLIN1O75477 346 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 ACTN2P35609 894 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 MAGEA9P43362 315 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 PLA2G4AP47712 749 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 SCARF1Q14162 830 aa8.02□□□□□ -1.13
CCR9-204ENST00000422395 CCDC30Q5VVM6 783 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms