RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KLRG1Q96E93 195 aa19.03■□□□□ 0.64
BRAT1-202ENST00000421712 DDX4Q9NQI0 724 aaKnown RBP19.03■□□□□ 0.64
BRAT1-202ENST00000421712 TCRBV5S4A2TA0A5A2 114 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 IREB2P48200 963 aaKnown RBP19.02■□□□□ 0.64
BRAT1-202ENST00000421712 DCAF15Q66K64 600 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 CYP4F22Q6NT55 531 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 RGMBQ6NW40 437 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 MIGA2Q7L4E1 593 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 MAPKAPK5Q8IW41 473 aa19.02■□□□□ 0.64
BRAT1-202ENST00000421712 USP2O75604 605 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-202ENST00000421712 ZFYP08048 801 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-202ENST00000421712 VEGFBP49765 207 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 UBE3CQ15386 1083 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
BRAT1-202ENST00000421712 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 EVI5LQ96CN4 794 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 HHIPL1Q96JK4 782 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 CAPNS2Q96L46 248 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 CSRNP1Q96S65 589 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 PAPPA2Q9BXP8 1791 aa19.01■□□□□ 0.63
BRAT1-202ENST00000421712 RNF113AO15541 343 aaKnown RBP19■□□□□ 0.63
BRAT1-202ENST00000421712 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
BRAT1-202ENST00000421712 CHGBP05060 677 aa19■□□□□ 0.63
BRAT1-202ENST00000421712 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
BRAT1-202ENST00000421712 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
BRAT1-202ENST00000421712 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
BRAT1-202ENST00000421712 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-202ENST00000421712 DDTLA6NHG4 134 aaPredicted RBP18.99■□□□□ 0.63
BRAT1-202ENST00000421712 MBD4O95243 580 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 CCDC102AQ96A19 550 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 AIDAQ96BJ3 306 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
BRAT1-202ENST00000421712 ZNF341Q9BYN7 854 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 OSBPL3Q9H4L5 887 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 ARMT1Q9H993 441 aa18.99■□□□□ 0.63
BRAT1-202ENST00000421712 SAP30BPQ9UHR5 308 aaKnown RBP18.99■□□□□ 0.63
BRAT1-202ENST00000421712 SSC5DA1L4H1 1573 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 PDE4AP27815 886 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 SH3BP5LQ7L8J4 393 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 LCORLQ8N3X6 602 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 SLC10A4Q96EP9 437 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 MYH7P12883 1935 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 FLT1P17948 1338 aa18.98■□□□□ 0.63
BRAT1-202ENST00000421712 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 MAP3K9P80192 1104 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 MAP3K11Q16584 847 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 ANKRD13AQ8IZ07 590 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 APPBP2Q92624 585 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 TRIM34Q9BYJ4 488 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
BRAT1-202ENST00000421712 DHX36Q9H2U1 1008 aaKnown RBP18.97■□□□□ 0.63
BRAT1-202ENST00000421712 CSADQ9Y600 493 aa18.97■□□□□ 0.63
BRAT1-202ENST00000421712 SLC4A8Q2Y0W8 1093 aa18.96■□□□□ 0.63
BRAT1-202ENST00000421712 LDLRAD1Q5T700 205 aa18.96■□□□□ 0.63
BRAT1-202ENST00000421712 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.63
BRAT1-202ENST00000421712 PALD1Q9ULE6 856 aa18.96■□□□□ 0.63
BRAT1-202ENST00000421712 AOC2O75106 756 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 POLR3DP05423 398 aaPredicted RBP18.95■□□□□ 0.62
BRAT1-202ENST00000421712 HLA-DOAP06340 250 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 MKRN3Q13064 507 aaKnown RBP18.95■□□□□ 0.62
BRAT1-202ENST00000421712 SDR42E1Q8WUS8 393 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 CLMNQ96JQ2 1002 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 PI4KBQ9UBF8 816 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 SLC4A4Q9Y6R1 1079 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 CEP350Q5VT06 3117 aa18.95■□□□□ 0.62
BRAT1-202ENST00000421712 PRKAB2O43741 272 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 RASAL3Q86YV0 1011 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 CRACR2BQ8N4Y2 399 aaPredicted RBP18.94■□□□□ 0.62
BRAT1-202ENST00000421712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.94■□□□□ 0.62
BRAT1-202ENST00000421712 ELP3Q9H9T3 547 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 MCM9Q9NXL9 1143 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 PPP4R2Q9NY27 417 aa18.94■□□□□ 0.62
BRAT1-202ENST00000421712 UNCXA6NJT0 531 aa18.93■□□□□ 0.62
BRAT1-202ENST00000421712 SLC10A3P09131 477 aa18.93■□□□□ 0.62
BRAT1-202ENST00000421712 SLURP2P0DP57 97 aa18.93■□□□□ 0.62
BRAT1-202ENST00000421712 NOGQ13253 232 aa18.93■□□□□ 0.62
BRAT1-202ENST00000421712 ZKSCAN4Q969J2 545 aaPredicted RBP18.93■□□□□ 0.62
BRAT1-202ENST00000421712 ATRNL1Q5VV63 1379 aa18.93■□□□□ 0.62
BRAT1-202ENST00000421712 FAM196BA6NMK8 535 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 FAM155AB1AL88 458 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-202ENST00000421712 M0R2C6 588 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 GPAA1O43292 621 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 APPP05067 770 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 INPP5BP32019 993 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 MAP2K2P36507 400 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 VGLL4Q14135 290 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 TTC22Q5TAA0 569 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-202ENST00000421712 TTC6Q86TZ1 520 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
BRAT1-202ENST00000421712 STRBPQ96SI9 672 aaKnown RBP18.92■□□□□ 0.62
BRAT1-202ENST00000421712 SEC62Q99442 399 aaKnown RBP18.92■□□□□ 0.62
BRAT1-202ENST00000421712 ATP8A2Q9NTI2 1148 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
BRAT1-202ENST00000421712 TBC1D12O60347 775 aa18.91■□□□□ 0.62
BRAT1-202ENST00000421712 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms