RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 ZFPM1Q8IX07 1006 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 DCP1AQ9NPI6 582 aaPredicted RBP18.81■□□□□ 0.6
DDX55-203ENST00000421670 CLEC11AQ9Y240 323 aa18.81■□□□□ 0.6
DDX55-203ENST00000421670 PATL2C9JE40 543 aaKnown RBP18.8■□□□□ 0.6
DDX55-203ENST00000421670 SAP30BPQ9UHR5 308 aaKnown RBP18.8■□□□□ 0.6
DDX55-203ENST00000421670 PITPNM2Q9BZ72 1349 aa18.8■□□□□ 0.6
DDX55-203ENST00000421670 SEC24BO95487 1268 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 TDO2P48775 406 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 APOBEC3FQ8IUX4 373 aaKnown RBP18.79■□□□□ 0.6
DDX55-203ENST00000421670 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 TMEM39BQ9GZU3 492 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
DDX55-203ENST00000421670 OSBPL5Q9H0X9 879 aaPredicted RBP18.79■□□□□ 0.6
DDX55-203ENST00000421670 ATP8A2Q9NTI2 1148 aa18.79■□□□□ 0.6
DDX55-203ENST00000421670 MKRN1Q9UHC7 482 aaKnown RBP18.79■□□□□ 0.6
DDX55-203ENST00000421670 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
DDX55-203ENST00000421670 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
DDX55-203ENST00000421670 ZC3H15Q8WU90 426 aaKnown RBP18.78■□□□□ 0.6
DDX55-203ENST00000421670 DCPSQ96C86 337 aaKnown RBP18.78■□□□□ 0.6
DDX55-203ENST00000421670 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
DDX55-203ENST00000421670 RPAP1Q9BWH6 1393 aaPredicted RBP18.77■□□□□ 0.6
DDX55-203ENST00000421670 ADM5C9JUS6 153 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 EVX2Q03828 476 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 RASA3Q14644 834 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 FAM83AQ86UY5 434 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 ZNF784Q8NCA9 323 aaPredicted RBP18.77■□□□□ 0.6
DDX55-203ENST00000421670 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 DSCC1Q9BVC3 393 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 NACAP1Q9BZK3 213 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 NAPBQ9H115 298 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 DEFB129Q9H1M3 183 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 PGAP2Q9UHJ9 254 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 PALD1Q9ULE6 856 aa18.77■□□□□ 0.6
DDX55-203ENST00000421670 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.59
DDX55-203ENST00000421670 CYP2D7A0A087X1C5 515 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 ENTPD3O75355 529 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 TNNI2P48788 182 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
DDX55-203ENST00000421670 DLK2Q6UY11 383 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 SH3BP5LQ7L8J4 393 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 LDHDQ86WU2 507 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 FAM151AQ8WW52 585 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 DDTLA6NHG4 134 aaPredicted RBP18.76■□□□□ 0.59
DDX55-203ENST00000421670 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 KIF3CO14782 793 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
DDX55-203ENST00000421670 REC8O95072 547 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 FGAP02671 866 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 CYP2D6P10635 497 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 GIMAP6Q6P9H5 292 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 KRT26Q7Z3Y9 468 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 SULF1Q8IWU6 871 aa18.76■□□□□ 0.59
DDX55-203ENST00000421670 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
DDX55-203ENST00000421670 ATRNL1Q5VV63 1379 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 ZMYM6O95789 1325 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 USP17L21D6R901 530 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 PRAMEF18Q5VWM3 479 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 CTR9Q6PD62 1173 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 MAP4K1Q92918 833 aa18.75■□□□□ 0.59
DDX55-203ENST00000421670 GLIS2Q9BZE0 524 aaPredicted RBP18.75■□□□□ 0.59
DDX55-203ENST00000421670 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
DDX55-203ENST00000421670 TRPM7Q96QT4 1865 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 ALX1Q15699 326 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 USP48Q86UV5 1035 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 ARPP21Q9UBL0 812 aaPredicted RBP18.74■□□□□ 0.59
DDX55-203ENST00000421670 ATAD5Q96QE3 1844 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 SSC5DA1L4H1 1573 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 OTOFQ9HC10 1997 aa18.74■□□□□ 0.59
DDX55-203ENST00000421670 MINDY4BA8MYZ0 360 aa18.73■□□□□ 0.59
DDX55-203ENST00000421670 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
DDX55-203ENST00000421670 SLURP2P0DP57 97 aa18.73■□□□□ 0.59
DDX55-203ENST00000421670 PLCD1P51178 756 aa18.73■□□□□ 0.59
DDX55-203ENST00000421670 HAND2P61296 217 aa18.73■□□□□ 0.59
DDX55-203ENST00000421670 CSRNP1Q96S65 589 aa18.73■□□□□ 0.59
DDX55-203ENST00000421670 STK11IPQ8N1F8 1099 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 BACH2Q9BYV9 841 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
DDX55-203ENST00000421670 SBK1Q52WX2 424 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 NBPF12Q5TAG4 269 aaPredicted RBP18.72■□□□□ 0.59
DDX55-203ENST00000421670 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 AMOTL1Q8IY63 956 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 DHX36Q9H2U1 1008 aaKnown RBP18.72■□□□□ 0.59
DDX55-203ENST00000421670 PPP2R3BQ9Y5P8 575 aa18.72■□□□□ 0.59
DDX55-203ENST00000421670 PAPPA2Q9BXP8 1791 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 FAM196BA6NMK8 535 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 TRAF5O00463 557 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 HLA-DOAP06340 250 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 PPARAQ07869 468 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 CHADLQ6NUI6 762 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 CDC37L1Q7L3B6 337 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 ROBO3Q96MS0 1386 aa18.71■□□□□ 0.59
DDX55-203ENST00000421670 CTDSPL2Q05D32 466 aa18.7■□□□□ 0.58
DDX55-203ENST00000421670 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX55-203ENST00000421670 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms