RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 GTPBP4Q9BZE4 634 aaKnown RBP12.2□□□□□ -0.46
PTCH1-206ENST00000421141 AZI2Q9H6S1 392 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-206ENST00000421141 TAF12Q16514 161 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 TEX35Q5T0J7 233 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 TFIP11Q9UBB9 837 aaKnown RBP12.2□□□□□ -0.46
PTCH1-206ENST00000421141 ARHGEF28Q8N1W1 1705 aaKnown RBP12.2□□□□□ -0.46
PTCH1-206ENST00000421141 IREB2P48200 963 aaKnown RBP12.2□□□□□ -0.46
PTCH1-206ENST00000421141 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
PTCH1-206ENST00000421141 SPATA31D1Q6ZQQ2 1576 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 DEXIO95424 95 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 ATP5JP18859 108 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 TRIM6Q9C030 488 aaPredicted RBP12.19□□□□□ -0.46
PTCH1-206ENST00000421141 OSBPP22059 807 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 UBE2HP62256 183 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 TMX3Q96JJ7 454 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 PANK2Q9BZ23 570 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 NEFHP12036 1026 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
PTCH1-206ENST00000421141 DBNDD1Q9H9R9 158 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 RAD17O75943 681 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 HAUS3Q68CZ6 603 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 FAM212AQ96EL1 285 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 IFT74Q96LB3 600 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
PTCH1-206ENST00000421141 RXRAP19793 462 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 BTDP43251 543 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 CCNA1P78396 465 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 GRAPQ13588 217 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-206ENST00000421141 SYCE3A1L190 88 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 ZSCAN22P10073 491 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-206ENST00000421141 ARHGAP29Q52LW3 1261 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 CCDC129Q6ZRS4 1044 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 TBC1D32Q96NH3 1257 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 ASIC1P78348 528 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 HS2ST1Q7LGA3 356 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 MMRN2Q9H8L6 949 aa12.18□□□□□ -0.46
PTCH1-206ENST00000421141 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
PTCH1-206ENST00000421141 TDRD12Q587J7 1177 aaKnown RBP12.18□□□□□ -0.46
PTCH1-206ENST00000421141 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
PTCH1-206ENST00000421141 USP32Q8NFA0 1604 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 DCCP43146 1447 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 ATG3Q9NT62 314 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 PKD2L1Q9P0L9 805 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 MCM4P33991 863 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 AFMP43652 599 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 DNM2P50570 870 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 ABCB5Q2M3G0 1257 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 RPS6KB1P23443 525 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 CTNNA2P26232 953 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 YEATS4O95619 227 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 USP44Q9H0E7 712 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 C21orf2O43822 256 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 TFAP4Q01664 338 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 LETM2Q2VYF4 491 aa12.17□□□□□ -0.46
PTCH1-206ENST00000421141 FAM177A1Q8N128 213 aaPredicted RBP12.17□□□□□ -0.46
PTCH1-206ENST00000421141 CTDSPL2Q05D32 466 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 ZRSR2Q15696 482 aaKnown RBP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 PSMA7O14818 248 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 USO1O60763 962 aaKnown RBP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 CAVIN2O95810 425 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 ADCY7P51828 1080 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 HACE1Q8IYU2 909 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 PPARAQ07869 468 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 FLOT1O75955 427 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 SLC27A2O14975 620 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 USP14P54578 494 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 ENOX2Q16206 610 aaKnown RBP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 ABCC4O15439 1325 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 CNGA1P29973 690 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
PTCH1-206ENST00000421141 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
PTCH1-206ENST00000421141 HAUS7Q99871 368 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms