RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 FOXD4L6Q3SYB3 417 aaPredicted RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 FOXD4L3Q6VB84 417 aaPredicted RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 DHX37Q8IY37 1157 aaKnown RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 TJP1Q07157 1748 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 ANP32BQ92688 251 aaKnown RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
BDNF-209ENST00000420794 FOSBP53539 338 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 ALX1Q15699 326 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 DDX11Q96FC9 970 aa8.66□□□□□ -1.02
BDNF-209ENST00000420794 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
BDNF-209ENST00000420794 PRKAB2O43741 272 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 CALM1P0DP23 149 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 CALM2P0DP24 149 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 CALM3P0DP25 149 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
BDNF-209ENST00000420794 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 MROH7-TTC4A0A0A0MT08 1334 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 IL1R1P14778 569 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 NT5C2P49902 561 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 TNFAIP1Q13829 316 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 SYAP1Q96A49 352 aaPredicted RBP8.65□□□□□ -1.02
BDNF-209ENST00000420794 NUP98P52948 1817 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 NECAB1Q8N987 351 aa8.65□□□□□ -1.02
BDNF-209ENST00000420794 PRDM1O75626 825 aa8.65□□□□□ -1.03
BDNF-209ENST00000420794 GNAQP50148 359 aa8.65□□□□□ -1.03
BDNF-209ENST00000420794 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.03
BDNF-209ENST00000420794 VPS33BQ9H267 617 aa8.65□□□□□ -1.03
BDNF-209ENST00000420794 MYH14Q7Z406 1995 aaKnown RBP8.65□□□□□ -1.03
BDNF-209ENST00000420794 USP17L8P0C7I0 530 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 GJB2P29033 226 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 CRKP46108 304 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 SSRP1Q08945 709 aaKnown RBP8.64□□□□□ -1.03
BDNF-209ENST00000420794 TCP10Q12799 353 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 SKOR2Q2VWA4 1001 aaPredicted RBP8.64□□□□□ -1.03
BDNF-209ENST00000420794 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 RTN1Q16799 776 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 HOOK2Q96ED9 719 aa8.64□□□□□ -1.03
BDNF-209ENST00000420794 DHX36Q9H2U1 1008 aaKnown RBP8.64□□□□□ -1.03
BDNF-209ENST00000420794 ORC3Q9UBD5 711 aaPredicted RBP8.64□□□□□ -1.03
BDNF-209ENST00000420794 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 CCDC34Q96HJ3 373 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 C8orf76Q96K31 380 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 PSMD1Q99460 953 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 ZKSCAN3Q9BRR0 538 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 CHGBP05060 677 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 TFAP4Q01664 338 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 PPP2R5BQ15173 497 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 CCDC144CPQ8IYA2 1237 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 ZNF396Q96N95 335 aaPredicted RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 HHIPL2Q6UWX4 724 aa8.63□□□□□ -1.03
BDNF-209ENST00000420794 SH3RF3Q8TEJ3 882 aaPredicted RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 DCP1AQ9NPI6 582 aaPredicted RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 SEC63Q9UGP8 760 aaKnown RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
BDNF-209ENST00000420794 CFAP100Q494V2 611 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 RAB11FIP4Q86YS3 637 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 ZNF274Q96GC6 653 aaPredicted RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 STX6O43752 255 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 MARCH6O60337 910 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 HDLBPQ00341 1268 aaKnown RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 LLPHQ9BRT6 129 aaKnown RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 IL25Q9H293 177 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 NF2P35240 595 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 FEZ1Q99689 392 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 RBM28Q9NW13 759 aaKnown RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 SWAP70Q9UH65 585 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 PPP4CP60510 307 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 KRT85P78386 507 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
BDNF-209ENST00000420794 SLC26A6Q9BXS9 759 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
BDNF-209ENST00000420794 TCP10L2B9ZVM9 353 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 CCDC17Q96LX7 622 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
BDNF-209ENST00000420794 GPR75-ASB3A0A0A6YYF3 556 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
BDNF-209ENST00000420794 PI4KBQ9UBF8 816 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
BDNF-209ENST00000420794 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms