RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 NSUN7Q8NE18 718 aaKnown RBP15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 GPHNQ9NQX3 736 aaPredicted RBP15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 ARPP21Q9UBL0 812 aaPredicted RBP15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 ECM29Q5VYK3 1845 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 SCN9AQ15858 1988 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 TCHHQ07283 1943 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 B4E1Z4 1266 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 MFSD14BQ5SR56 506 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 MTMR6Q9Y217 621 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 ORC4O43929 436 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 SLF2Q8IX21 1173 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 CERS5Q8N5B7 392 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 MRIQ9BWK5 157 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 INCENPQ9NQS7 918 aa15.76■□□□□ 0.11
TMEM50B-201ENST00000420455 GOLGA6L22H0YM25 854 aa15.75■□□□□ 0.11
TMEM50B-201ENST00000420455 BAG3O95817 575 aa15.75■□□□□ 0.11
TMEM50B-201ENST00000420455 DIXDC1Q155Q3 683 aa15.75■□□□□ 0.11
TMEM50B-201ENST00000420455 RIMBP2O15034 1052 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 PRPF40AO75400 957 aaKnown RBP15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 PDCP20941 246 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 RCAN1P53805 252 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 RHBDL3P58872 404 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 GAS2L3Q86XJ1 694 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 SH3RF3Q8TEJ3 882 aaPredicted RBP15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 GTF2IP78347 998 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 STK3Q13188 491 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 FGD1P98174 961 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
TMEM50B-201ENST00000420455 ADAMTSL1Q8N6G6 1762 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 USP17L12C9JPN9 530 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 USP17L21D6R901 530 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 KDM4AO75164 1064 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 TGFB2P61812 414 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 SEC23AQ15436 765 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 PSMD1Q99460 953 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 VPS33BQ9H267 617 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 DDX49Q9Y6V7 483 aaKnown RBP15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 F13A1P00488 732 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 PLCG2P16885 1265 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 C12orf60Q5U649 245 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 STRIP1Q5VSL9 837 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
TMEM50B-201ENST00000420455 KLF18A0A0U1RQI7 1052 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 SMIM22K7EJ46 135 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 JAK2O60674 1132 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 BTDP43251 543 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 TTLL6Q8N841 843 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 MTFR1LQ9H019 292 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 APOA5Q6Q788 366 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 HHIPL2Q6UWX4 724 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 MYH1P12882 1939 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 FER1L6Q2WGJ9 1857 aa15.72■□□□□ 0.11
TMEM50B-201ENST00000420455 TMTC2Q8N394 836 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 TMEM87AQ8NBN3 555 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 ESR2Q92731 530 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 SENP2Q9HC62 589 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 DAGLAQ9Y4D2 1042 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 DOK7Q18PE1 504 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
TMEM50B-201ENST00000420455 CYP2D7A0A087X1C5 515 aa15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 MINDY4BA8MYZ0 360 aa15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 FDPSP14324 419 aaKnown RBP15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 DPEP1P16444 411 aa15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 FOXD4L6Q3SYB3 417 aaPredicted RBP15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 LARP1BQ659C4 914 aaKnown RBP15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 FOXD4L3Q6VB84 417 aaPredicted RBP15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 RTKN2Q8IZC4 609 aa15.71■□□□□ 0.1
TMEM50B-201ENST00000420455 PTPDC1A2A3K4 754 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 DHX16O60231 1041 aaKnown RBP15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 ECE2O60344 883 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 HDLBPQ00341 1268 aaKnown RBP15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 TMEM67Q5HYA8 995 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 GDPD2Q9HCC8 539 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 FAM217BQ9NTX9 383 aaPredicted RBP15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 GOLGA6L3A6NEY3 463 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 NCOA5Q9HCD5 579 aaKnown RBP15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 COL4A5P29400 1685 aa15.7■□□□□ 0.1
TMEM50B-201ENST00000420455 GOLGA8BA8MQT2 603 aa15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 EVX2Q03828 476 aa15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 CCDC93Q567U6 631 aa15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 NTRK3Q16288 839 aa15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 IFIT3O14879 490 aaKnown RBP15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 CYP2D6P10635 497 aa15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 UPF1Q92900 1129 aaKnown RBP eCLIP15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 RBM27Q9P2N5 1060 aaKnown RBP15.69■□□□□ 0.1
TMEM50B-201ENST00000420455 FLT1P17948 1338 aa15.68■□□□□ 0.1
TMEM50B-201ENST00000420455 GADD45BO75293 160 aaPredicted RBP15.68■□□□□ 0.1
TMEM50B-201ENST00000420455 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
TMEM50B-201ENST00000420455 USP17L8P0C7I0 530 aa15.68■□□□□ 0.1
TMEM50B-201ENST00000420455 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
TMEM50B-201ENST00000420455 CAVIN1Q6NZI2 390 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms