RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 DDX4Q9NQI0 724 aaKnown RBP18.16■□□□□ 0.5
CDRT15-201ENST00000420162 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
CDRT15-201ENST00000420162 SCAF8Q9UPN6 1271 aaKnown RBP18.16■□□□□ 0.5
CDRT15-201ENST00000420162 CDCA5Q96FF9 252 aa18.15■□□□□ 0.5
CDRT15-201ENST00000420162 TMEM39BQ9GZU3 492 aa18.15■□□□□ 0.5
CDRT15-201ENST00000420162 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
CDRT15-201ENST00000420162 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
CDRT15-201ENST00000420162 FLT1P17948 1338 aa18.15■□□□□ 0.5
CDRT15-201ENST00000420162 RPAP1Q9BWH6 1393 aaPredicted RBP18.15■□□□□ 0.5
CDRT15-201ENST00000420162 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.49
CDRT15-201ENST00000420162 TRAF5O00463 557 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 NF2P35240 595 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 CASC1Q6TDU7 716 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 MAPKAPK5Q8IW41 473 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 TEPSINQ96N21 525 aa18.14■□□□□ 0.49
CDRT15-201ENST00000420162 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.49
CDRT15-201ENST00000420162 PRKAB2O43741 272 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 CDC45O75419 566 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 ZSCAN29Q8IWY8 852 aaPredicted RBP18.13■□□□□ 0.49
CDRT15-201ENST00000420162 ZFPM1Q8IX07 1006 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 DCP1AQ9NPI6 582 aaPredicted RBP18.13■□□□□ 0.49
CDRT15-201ENST00000420162 MKRN1Q9UHC7 482 aaKnown RBP18.13■□□□□ 0.49
CDRT15-201ENST00000420162 RAD50Q92878 1312 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 PASKQ96RG2 1323 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 CDK5RAP2Q96SN8 1893 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
CDRT15-201ENST00000420162 COL2A1P02458 1487 aaPredicted RBP18.13■□□□□ 0.49
CDRT15-201ENST00000420162 FOCADQ5VW36 1801 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 APPP05067 770 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 NBPF12Q5TAG4 269 aaPredicted RBP18.12■□□□□ 0.49
CDRT15-201ENST00000420162 PRAMEF18Q5VWM3 479 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 CCDC129Q6ZRS4 1044 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 SDR42E1Q8WUS8 393 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 CCDC171Q6TFL3 1326 aa18.12■□□□□ 0.49
CDRT15-201ENST00000420162 GSG1L2A8MUP6 293 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 TTC6Q86TZ1 520 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 AMOTL1Q8IY63 956 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 CSRNP1Q96S65 589 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 MCM9Q9NXL9 1143 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
CDRT15-201ENST00000420162 DDTLA6NHG4 134 aaPredicted RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 CELF2O95319 508 aaKnown RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 POLR3DP05423 398 aaPredicted RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 HLA-DOAP06340 250 aa18.1■□□□□ 0.49
CDRT15-201ENST00000420162 DCAF15Q66K64 600 aa18.1■□□□□ 0.49
CDRT15-201ENST00000420162 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
CDRT15-201ENST00000420162 ZNF589Q86UQ0 364 aaPredicted RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 SAP30BPQ9UHR5 308 aaKnown RBP18.1■□□□□ 0.49
CDRT15-201ENST00000420162 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
CDRT15-201ENST00000420162 SGSM2O43147 1006 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 PPP1R12BO60237 982 aaPredicted RBP18.09■□□□□ 0.49
CDRT15-201ENST00000420162 FKBP1BP68106 108 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 ALX1Q15699 326 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 IFNL3Q8IZI9 196 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 ZNF408Q9H9D4 720 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 TAOK2Q9UL54 1235 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 MYH1P12882 1939 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 TRPM7Q96QT4 1865 aa18.09■□□□□ 0.49
CDRT15-201ENST00000420162 TBC1D12O60347 775 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.48
CDRT15-201ENST00000420162 TDO2P48775 406 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 FMR1Q06787 632 aaKnown RBP eCLIP18.08■□□□□ 0.48
CDRT15-201ENST00000420162 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 CST9Q5W186 159 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 CDAN1Q8IWY9 1227 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 C2orf69Q8N8R5 385 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 NAPBQ9H115 298 aa18.08■□□□□ 0.48
CDRT15-201ENST00000420162 ARPP21Q9UBL0 812 aaPredicted RBP18.08■□□□□ 0.48
CDRT15-201ENST00000420162 USP17L12C9JPN9 530 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 USP17L21D6R901 530 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 MAP3K10Q02779 954 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 ARMC9Q7Z3E5 817 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 EHD4Q9H223 541 aa18.07■□□□□ 0.48
CDRT15-201ENST00000420162 GBA2Q9HCG7 927 aaPredicted RBP18.07■□□□□ 0.48
CDRT15-201ENST00000420162 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
CDRT15-201ENST00000420162 HERC5Q9UII4 1024 aaKnown RBP18.07■□□□□ 0.48
CDRT15-201ENST00000420162 NAV1Q8NEY1 1877 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 TMEM88BA6NKF7 163 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 FOXP2O15409 715 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 APLP1P51693 650 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 C1QTNF8P60827 252 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
CDRT15-201ENST00000420162 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 METTL16Q86W50 562 aaKnown RBP18.06■□□□□ 0.48
CDRT15-201ENST00000420162 TRIM34Q9BYJ4 488 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 ZNF341Q9BYN7 854 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 IL25Q9H293 177 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 SERPINB13Q9UIV8 391 aa18.06■□□□□ 0.48
CDRT15-201ENST00000420162 BAZ2AQ9UIF9 1905 aaKnown RBP18.06■□□□□ 0.48
CDRT15-201ENST00000420162 ZMYM6O95789 1325 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms