RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
HMGN1P4-201ENST00000419500 BAG3O95817 575 aa15.53■□□□□ 0.08
HMGN1P4-201ENST00000419500 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
HMGN1P4-201ENST00000419500 ALDH1A1P00352 501 aa15.53■□□□□ 0.08
HMGN1P4-201ENST00000419500 OTUD5Q96G74 571 aa15.53■□□□□ 0.08
HMGN1P4-201ENST00000419500 IGSF3O75054 1194 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 WDHD1O75717 1129 aaPredicted RBP15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 IDH1O75874 414 aaKnown RBP15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 TBC1D8O95759 1140 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 GJA5P36382 358 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 OTUD7BQ6GQQ9 843 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 ZKSCAN4Q969J2 545 aaPredicted RBP15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.08
HMGN1P4-201ENST00000419500 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 CAPN15O75808 1086 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 PLCG2P16885 1265 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 RHBDL3P58872 404 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 ERO1BQ86YB8 467 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 TEX11Q8IYF3 940 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 LRRCC1Q9C099 1032 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 DDX4Q9NQI0 724 aaKnown RBP15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 PIH1D3Q9NQM4 214 aaKnown RBP15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 AATFQ9NY61 560 aaKnown RBP eCLIP15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 NDUFB9Q9Y6M9 179 aa15.51■□□□□ 0.07
HMGN1P4-201ENST00000419500 INPP5BP32019 993 aa15.5■□□□□ 0.07
HMGN1P4-201ENST00000419500 GTF2A2P52657 109 aa15.5■□□□□ 0.07
HMGN1P4-201ENST00000419500 MAP3K12Q12852 859 aa15.5■□□□□ 0.07
HMGN1P4-201ENST00000419500 SH3RF3Q8TEJ3 882 aaPredicted RBP15.5■□□□□ 0.07
HMGN1P4-201ENST00000419500 ATRNL1Q5VV63 1379 aa15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 MYO5AQ9Y4I1 1855 aaKnown RBP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 COL2A1P02458 1487 aaPredicted RBP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 IGF2BP3O00425 579 aaKnown RBP eCLIP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 DGKZQ13574 1117 aa15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 TTF1Q15361 905 aaPredicted RBP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 OSBPL5Q9H0X9 879 aaPredicted RBP15.49■□□□□ 0.07
HMGN1P4-201ENST00000419500 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 CYP7A1P22680 504 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 CCL15Q16663 113 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 TMED8Q6PL24 325 aaPredicted RBP15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 SH3BP5LQ7L8J4 393 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 ADGRA1Q86SQ6 560 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 CERS3Q8IU89 383 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 MAGEB6Q8N7X4 407 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 CFHR5Q9BXR6 569 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 ANTXR1Q9H6X2 564 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 ZNF112Q9UJU3 913 aa15.48■□□□□ 0.07
HMGN1P4-201ENST00000419500 TESPA1A2RU30 521 aaPredicted RBP15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 IRF6O14896 467 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 CETPP11597 493 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 PPP4CP60510 307 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 PPATQ06203 517 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 PPIL2Q13356 520 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 NOL9Q5SY16 702 aaKnown RBP15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 ZNF296Q8WUU4 475 aaPredicted RBP15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 PICK1Q9NRD5 415 aa15.47■□□□□ 0.07
HMGN1P4-201ENST00000419500 GPR25O00155 361 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 GOLIM4O00461 696 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 NOM1Q5C9Z4 860 aaKnown RBP15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 MIGA1Q8NAN2 632 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 TGFBRAP1Q8WUH2 860 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 BRI3BPQ8WY22 251 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 PTPN18Q99952 460 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 MCOLN1Q9GZU1 580 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.46■□□□□ 0.07
HMGN1P4-201ENST00000419500 FLT1P17948 1338 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 FOCADQ5VW36 1801 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 FKTNO75072 461 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 CTU1Q7Z7A3 348 aaKnown RBP15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 MAPKAPK5Q8IW41 473 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 SCYL3Q8IZE3 742 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 GPATCH3Q96I76 525 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 CRBNQ96SW2 442 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 TRIM34Q9BYJ4 488 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 DOCK1Q14185 1865 aa15.45■□□□□ 0.06
HMGN1P4-201ENST00000419500 FAM196BA6NMK8 535 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 PHF20L1A8MW92 1017 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 CTNND1O60716 968 aaKnown RBP15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 ATP5JP18859 108 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 USP5P45974 858 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 DYNLL1P63167 89 aaKnown RBP15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 MAP3K10Q02779 954 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 CRHR2Q13324 411 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 TAF1CQ15572 869 aaPredicted RBP15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 SLC9C2Q5TAH2 1124 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 DCTPP1Q9H773 170 aa15.44■□□□□ 0.06
HMGN1P4-201ENST00000419500 PAG1Q9NWQ8 432 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms