RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ZKSCAN5Q9Y2L8 839 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 NPHP1O15259 732 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ME1P48163 572 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 MICU3Q86XE3 530 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 IQCA1Q86XH1 822 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LINC00301Q8NCQ3 95 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 NOL10Q9BSC4 688 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 ALG1Q9BT22 464 aa16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
HLA-DPA1-242ENST00000419277 LRRC37AA6NMS7 1700 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 XDHP47989 1333 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 GOLGA6L6A8MZA4 724 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SNAP23O00161 211 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 STK38Q15208 465 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SAFBQ15424 915 aaKnown RBP eCLIP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 RTN1Q16799 776 aa16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ILDR1Q86SU0 546 aaPredicted RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 GPHNQ9NQX3 736 aaPredicted RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 MORC2Q9Y6X9 1032 aaPredicted RBP16.89■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PPP6R2O75170 966 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 NR1I2O75469 434 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 DEXIO95424 95 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 XBP1P17861 261 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 GSTO1P78417 241 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SF3A1Q15459 793 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CCAR1Q8IX12 1150 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 BAZ2AQ9UIF9 1905 aaKnown RBP16.88■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SPTLC2O15270 562 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ORC4O43929 436 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ST5P78524 1137 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 RNF26Q9BY78 433 aaPredicted RBP16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 IRS2Q9Y4H2 1338 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PTMAP06454 111 aaKnown RBP16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 TM4SF1P30408 202 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CTDSPL2Q05D32 466 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 GNL2Q13823 731 aaKnown RBP16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 STX1AQ16623 288 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CRY2Q49AN0 593 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ANO1Q5XXA6 986 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ZNF804AQ7Z570 1209 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ENGASEQ8NFI3 743 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
HLA-DPA1-242ENST00000419277 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 DDAH1O94760 285 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CCDC178Q5BJE1 867 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 KRT40Q6A162 431 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SEPT12Q8IYM1 358 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 TIGD1Q96MW7 591 aa16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FOXP1Q9H334 677 aaPredicted RBP16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
HLA-DPA1-242ENST00000419277 NFIXQ14938 502 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SLC39A14Q15043 492 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ZNF654Q8IZM8 581 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FSIP1Q8NA03 581 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 TDRD7Q8NHU6 1098 aaKnown RBP16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ANO10Q9NW15 660 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 NAV1Q8NEY1 1877 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PRKAB2O43741 272 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ADCY5O95622 1261 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CMA1P23946 247 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CDC27P30260 824 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 MECOMQ03112 1051 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PDE4BQ07343 736 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SNW1Q13573 536 aaKnown RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 SEC23AQ15436 765 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 ADGRA1Q86SQ6 560 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FANCBQ8NB91 859 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FAM217BQ9NTX9 383 aaPredicted RBP16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PCDHA7Q9UN72 937 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 TNKSO95271 1327 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 DTNBO60941 627 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 LDHCP07864 332 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 GUCY1B3Q02153 619 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 RILPL1Q5EBL4 403 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
HLA-DPA1-242ENST00000419277 CATIPQ7Z7H3 387 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms