RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
CHMP5-202ENST00000419016 ADAMTSL1Q8N6G6 1762 aa16.34■□□□□ 0.21
CHMP5-202ENST00000419016 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
CHMP5-202ENST00000419016 CYP2D7A0A087X1C5 515 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.21
CHMP5-202ENST00000419016 USP5P45974 858 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 CUL4AQ13619 759 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.21
CHMP5-202ENST00000419016 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 MINDY4BA8MYZ0 360 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 ANTXR2P58335 489 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 EVX2Q03828 476 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 CIAPIN1Q6FI81 312 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 MCM9Q9NXL9 1143 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 FLT1P17948 1338 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 NEDD4P46934 1319 aa16.33■□□□□ 0.2
CHMP5-202ENST00000419016 UTRNP46939 3433 aa16.32■□□□□ 0.2
CHMP5-202ENST00000419016 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
CHMP5-202ENST00000419016 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
CHMP5-202ENST00000419016 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
CHMP5-202ENST00000419016 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
CHMP5-202ENST00000419016 CYP2D6P10635 497 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 MCM5P33992 734 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 Q6ZUG5 572 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 FOCADQ5VW36 1801 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 DDIT3P35638 169 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 TRDNQ13061 729 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 TNIP1Q15025 636 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 RALYLQ86SE5 291 aaKnown RBP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 DDX4Q9NQI0 724 aaKnown RBP16.31■□□□□ 0.2
CHMP5-202ENST00000419016 ROBO3Q96MS0 1386 aa16.31■□□□□ 0.2
CHMP5-202ENST00000419016 B4E1Z4 1266 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 EVCP57679 992 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 MTMR14Q8NCE2 650 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 KRT23Q9C075 422 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 ZSWIM5Q9P217 1185 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 LAMB1P07942 1786 aa16.3■□□□□ 0.2
CHMP5-202ENST00000419016 PRC1O43663 620 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 ORC4O43929 436 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
CHMP5-202ENST00000419016 LARGE1O95461 756 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 LMNB1P20700 586 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
CHMP5-202ENST00000419016 PRMT6Q96LA8 375 aaPredicted RBP16.29■□□□□ 0.2
CHMP5-202ENST00000419016 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
CHMP5-202ENST00000419016 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 MMP14P50281 582 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 PLCD1P51178 756 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 ME3Q16798 604 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 ZBED3Q96IU2 234 aaPredicted RBP16.29■□□□□ 0.2
CHMP5-202ENST00000419016 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
CHMP5-202ENST00000419016 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
CHMP5-202ENST00000419016 NFIAQ12857 509 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 BRF1Q92994 677 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 INTS4Q96HW7 963 aaKnown RBP16.28■□□□□ 0.2
CHMP5-202ENST00000419016 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
CHMP5-202ENST00000419016 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
CHMP5-202ENST00000419016 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
CHMP5-202ENST00000419016 KDM4AO75164 1064 aa16.27■□□□□ 0.2
CHMP5-202ENST00000419016 RBM5P52756 815 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHMP5-202ENST00000419016 ZNF280AP59817 542 aaPredicted RBP16.27■□□□□ 0.2
CHMP5-202ENST00000419016 ST3GAL1Q11201 340 aa16.27■□□□□ 0.2
CHMP5-202ENST00000419016 OGFOD1Q8N543 542 aa16.27■□□□□ 0.2
CHMP5-202ENST00000419016 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
CHMP5-202ENST00000419016 MTA3Q9BTC8 594 aa16.27■□□□□ 0.2
CHMP5-202ENST00000419016 SAP30BPQ9UHR5 308 aaKnown RBP16.27■□□□□ 0.2
CHMP5-202ENST00000419016 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.19
CHMP5-202ENST00000419016 DPF2Q92785 391 aa16.27■□□□□ 0.19
CHMP5-202ENST00000419016 TMEM87BQ96K49 555 aa16.27■□□□□ 0.19
CHMP5-202ENST00000419016 OSBPL5Q9H0X9 879 aaPredicted RBP16.27■□□□□ 0.19
CHMP5-202ENST00000419016 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.19
CHMP5-202ENST00000419016 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.19
CHMP5-202ENST00000419016 SBF1O95248 1867 aa16.26■□□□□ 0.19
CHMP5-202ENST00000419016 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
CHMP5-202ENST00000419016 SH2B2O14492 632 aaPredicted RBP16.26■□□□□ 0.19
CHMP5-202ENST00000419016 SOCS7O14512 581 aa16.26■□□□□ 0.19
CHMP5-202ENST00000419016 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
CHMP5-202ENST00000419016 NT5C2P49902 561 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms