RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RTEL1Q9NZ71 1219 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 TMEM131LA2VDJ0 1609 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 PSMB7Q99436 277 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 IFIT3O14879 490 aaKnown RBP13.3□□□□□ -0.28
DDR1-232ENST00000418800 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 CCDC93Q567U6 631 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDR1-232ENST00000418800 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 VSNL1P62760 191 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 CCDC148Q8NFR7 591 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 BCAS4Q8TDM0 211 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 KAZALD1Q96I82 304 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 USP8P40818 1118 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 BRD3Q15059 726 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 SPECC1LQ69YQ0 1117 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 TRIM65Q6PJ69 517 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 PNKPQ96T60 521 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
DDR1-232ENST00000418800 DENND2AQ9ULE3 1009 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 RNF113AO15541 343 aaKnown RBP13.29□□□□□ -0.28
DDR1-232ENST00000418800 IPO7O95373 1038 aaKnown RBP13.29□□□□□ -0.28
DDR1-232ENST00000418800 FGAP02671 866 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 ERCC3P19447 782 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 INPP5BP32019 993 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 TMEM67Q5HYA8 995 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 CEP112Q8N8E3 955 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 AKAP2Q9Y2D5 859 aa13.29□□□□□ -0.28
DDR1-232ENST00000418800 NEXMIFQ5QGS0 1516 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 AKR1B15C9JRZ8 316 aaPredicted RBP13.28□□□□□ -0.28
DDR1-232ENST00000418800 TUBB4AP04350 444 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
DDR1-232ENST00000418800 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 TADA2BQ86TJ2 420 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 SLC35F6Q8N357 371 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 CXorf56Q9H5V9 222 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 GEMIN8Q9NWZ8 242 aaKnown RBP13.28□□□□□ -0.28
DDR1-232ENST00000418800 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
DDR1-232ENST00000418800 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
DDR1-232ENST00000418800 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
DDR1-232ENST00000418800 PTPN12Q05209 780 aaKnown RBP13.27□□□□□ -0.28
DDR1-232ENST00000418800 PDE4BQ07343 736 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 PPP2R5AQ15172 486 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 KIAA1328Q86T90 577 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 TICAM2Q86XR7 235 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.28
DDR1-232ENST00000418800 OSBP2Q969R2 916 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 MKRN1Q9UHC7 482 aaKnown RBP13.27□□□□□ -0.28
DDR1-232ENST00000418800 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 C3P01024 1663 aa13.27□□□□□ -0.28
DDR1-232ENST00000418800 TEX33O43247 280 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 ATP8B1O43520 1251 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 CMA1P23946 247 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 SLC4A8Q2Y0W8 1093 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 MCTP2Q6DN12 878 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 VSTM4Q8IW00 320 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 JADE2Q9NQC1 790 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 M0R2C6 588 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 ZBTB43O43298 467 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 ATP1A2P50993 1020 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 MMS22LQ6ZRQ5 1243 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 OTUD6BQ8N6M0 293 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 SIRT1Q96EB6 747 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 PLIN2Q99541 437 aa13.27□□□□□ -0.29
DDR1-232ENST00000418800 MRPL44Q9H9J2 332 aaKnown RBP13.27□□□□□ -0.29
DDR1-232ENST00000418800 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 GPTP24298 496 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 CDR1P51861 262 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
DDR1-232ENST00000418800 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 CNNM1Q9NRU3 951 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 YEATS4O95619 227 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 CDC25AP30304 524 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 ENOX2Q16206 610 aaKnown RBP13.26□□□□□ -0.29
DDR1-232ENST00000418800 FAM76AQ8TAV0 307 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 SLC24A3Q9HC58 644 aa13.26□□□□□ -0.29
DDR1-232ENST00000418800 BRMS1Q9HCU9 246 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms