RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.22
LIMK1-202ENST00000418310 FAM205CA6NFA0 338 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
LIMK1-202ENST00000418310 CDKL5O76039 1030 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 OLFM4Q6UX06 510 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 USP49Q70CQ1 688 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 ZNF771Q7L3S4 317 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-202ENST00000418310 SPATA5Q8NB90 893 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 KCPQ6ZWJ8 1503 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 SMIM5Q71RC9 77 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 STAMQ92783 540 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 FAM217BQ9NTX9 383 aaPredicted RBP13.7□□□□□ -0.22
LIMK1-202ENST00000418310 CPDO75976 1380 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
LIMK1-202ENST00000418310 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 NRDCO43847 1150 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 STX17P56962 302 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 MFSD6Q6ZSS7 791 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 URI1O94763 535 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 TOP1P11387 765 aaKnown RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 AFMP43652 599 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 MYL5Q02045 173 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 COL18A1P39060 1754 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 GLI3P10071 1580 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 SLU7O95391 586 aaKnown RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 ADKP55263 362 aaKnown RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 PTPAQ15257 358 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 CGNQ9P2M7 1197 aaKnown RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
LIMK1-202ENST00000418310 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-202ENST00000418310 DMTNQ08495 405 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 CPLX3Q8WVH0 158 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 CABP5Q9NP86 173 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 TJP1Q07157 1748 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 BAZ2BQ9UIF8 2168 aaKnown RBP13.68□□□□□ -0.22
LIMK1-202ENST00000418310 KCNQ4P56696 695 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 WTAPQ15007 396 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
LIMK1-202ENST00000418310 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIMK1-202ENST00000418310 NTRK3Q16288 839 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 RTN1Q16799 776 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 CCDC150Q8NCX0 1101 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 HSD3B7Q9H2F3 369 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 PDE8AO60658 829 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 BMP6P22004 513 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-202ENST00000418310 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 DESI2Q9BSY9 194 aa13.68□□□□□ -0.22
LIMK1-202ENST00000418310 OSBPL5Q9H0X9 879 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-202ENST00000418310 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-202ENST00000418310 ERICH2A1L162 156 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-202ENST00000418310 SLC5A1P13866 664 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 KRBA2Q6ZNG9 492 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-202ENST00000418310 LPIN2Q92539 896 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 DHX58Q96C10 678 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 ZSWIM4Q9H7M6 989 aa13.67□□□□□ -0.22
LIMK1-202ENST00000418310 ZNF142P52746 1687 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-202ENST00000418310 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 KARSQ15046 597 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 NOSTRINQ8IVI9 506 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 GSG1L2A8MUP6 293 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 EVX2Q03828 476 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 MYO5AQ9Y4I1 1855 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 CYP7A1P22680 504 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 TOB1P50616 345 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 UBAC1Q9BSL1 405 aa13.66□□□□□ -0.22
LIMK1-202ENST00000418310 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
LIMK1-202ENST00000418310 GYG1P46976 350 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms