RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 YEATS4O95619 227 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 SSRP1Q08945 709 aaKnown RBP12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 PROM2Q8N271 834 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 KCNG4Q8TDN1 519 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 MAP3K14Q99558 947 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 FAM205AQ6ZU69 1335 aa12.86□□□□□ -0.35
TRAPPC12-205ENST00000416918 PRKAB2O43741 272 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 DDAH1O94760 285 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 UFL1O94874 794 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 FDPSP14324 419 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 EYA3Q99504 573 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 NCOA5Q9HCD5 579 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 IQSEC3Q9UPP2 1182 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 NEDD4P46934 1319 aa12.85□□□□□ -0.35
TRAPPC12-205ENST00000416918 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 DEXIO95424 95 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 GPSM2P81274 684 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 DDR1Q08345 913 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 CHAF1AQ13111 956 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 RTN1Q16799 776 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 COL1A1P02452 1464 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC12-205ENST00000416918 SYCE3A1L190 88 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 USP17L21D6R901 530 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 PPEF1O14829 653 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 CCDC192P0DO97 292 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 SRGNP10124 158 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 GNAQP50148 359 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 NTRK3Q16288 839 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 ADGRA1Q86SQ6 560 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 DGKHQ86XP1 1220 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 RNF26Q9BY78 433 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 MORC2Q9Y6X9 1032 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC12-205ENST00000416918 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 PRDX5P30044 214 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 KIF5BP33176 963 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 USP5P45974 858 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 SEC23AQ15436 765 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 MAP3K11Q16584 847 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 RRP12Q5JTH9 1297 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 MICU3Q86XE3 530 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 COL23A1Q86Y22 540 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
TRAPPC12-205ENST00000416918 CACNA1SQ13698 1873 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms