RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
HMGA1P1-201ENST00000415560 MCM9Q9NXL9 1143 aa16.86■□□□□ 0.29
HMGA1P1-201ENST00000415560 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
HMGA1P1-201ENST00000415560 POLR3DP05423 398 aaPredicted RBP16.85■□□□□ 0.29
HMGA1P1-201ENST00000415560 EXOSC10Q01780 885 aaKnown RBP16.85■□□□□ 0.29
HMGA1P1-201ENST00000415560 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
HMGA1P1-201ENST00000415560 TOMM22Q9NS69 142 aa16.85■□□□□ 0.29
HMGA1P1-201ENST00000415560 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
HMGA1P1-201ENST00000415560 BAZ2AQ9UIF9 1905 aaKnown RBP16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 PDE4BQ07343 736 aa16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 Q6ZUG5 572 aa16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 TMX3Q96JJ7 454 aa16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 MTA3Q9BTC8 594 aa16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
HMGA1P1-201ENST00000415560 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 RHBDL3P58872 404 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 CXCL9Q07325 125 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 FBXL16Q8N461 479 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 SPRYD3Q8NCJ5 442 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 ESR2Q92731 530 aa16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 CWC22Q9HCG8 908 aaKnown RBP16.83■□□□□ 0.28
HMGA1P1-201ENST00000415560 ERICH2A1L162 156 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 PRC1O43663 620 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 USP17L8P0C7I0 530 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 SART3Q15020 963 aaKnown RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 MB21D2Q8IYB1 491 aaPredicted RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 MYH1P12882 1939 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
HMGA1P1-201ENST00000415560 LMNB1P20700 586 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 RASSF7Q02833 373 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 CUL4AQ13619 759 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 TMTC2Q8N394 836 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 GMLQ99445 158 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 NBPF3Q9H094 633 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 TMOD2Q9NZR1 351 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 NAV1Q8NEY1 1877 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 FOCADQ5VW36 1801 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 ECM29Q5VYK3 1845 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 LAMB1P07942 1786 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 TIAM2Q8IVF5 1701 aa16.81■□□□□ 0.28
HMGA1P1-201ENST00000415560 B4E1Z4 1266 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 FZD9O00144 591 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 FGRP09769 529 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 BRF1Q92994 677 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 AGXT2Q9BYV1 514 aa16.8■□□□□ 0.28
HMGA1P1-201ENST00000415560 FLT1P17948 1338 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 DICER1Q9UPY3 1922 aaKnown RBP16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 MYO1BO43795 1136 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 ORC4O43929 436 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 KDM4AO75164 1064 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 PICALMQ13492 652 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 CCDC178Q5BJE1 867 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 STK11IPQ8N1F8 1099 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 ZNF274Q96GC6 653 aaPredicted RBP16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 ZSWIM5Q9P217 1185 aa16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
HMGA1P1-201ENST00000415560 NEDD4P46934 1319 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 IFIT3O14879 490 aaKnown RBP16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 IQCA1Q86XH1 822 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 ZNF444Q8N0Y2 327 aaPredicted RBP16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 DPF2Q92785 391 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 UBAC1Q9BSL1 405 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 IDI2Q9BXS1 227 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 COL4A5P29400 1685 aa16.78■□□□□ 0.28
HMGA1P1-201ENST00000415560 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 LIFRP42702 1097 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 ME3Q16798 604 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms