RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
SNHG17-201ENST00000413755 DDX4Q9NQI0 724 aaKnown RBP17.79■□□□□ 0.44
SNHG17-201ENST00000413755 ABCF2Q9UG63 623 aa17.79■□□□□ 0.44
SNHG17-201ENST00000413755 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
SNHG17-201ENST00000413755 ZHX2Q9Y6X8 837 aa17.79■□□□□ 0.44
SNHG17-201ENST00000413755 PDS5AQ29RF7 1337 aaKnown RBP17.78■□□□□ 0.44
SNHG17-201ENST00000413755 A0A0G2JLL6 359 aaPredicted RBP17.78■□□□□ 0.44
SNHG17-201ENST00000413755 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
SNHG17-201ENST00000413755 TFCP2Q12800 502 aa17.78■□□□□ 0.44
SNHG17-201ENST00000413755 PRRT2Q7Z6L0 340 aaPredicted RBP17.78■□□□□ 0.44
SNHG17-201ENST00000413755 ZNF384Q8TF68 577 aa17.78■□□□□ 0.44
SNHG17-201ENST00000413755 XAGE2Q96GT9 111 aa17.78■□□□□ 0.44
SNHG17-201ENST00000413755 PARK7Q99497 189 aaKnown RBP17.78■□□□□ 0.44
SNHG17-201ENST00000413755 MYPNQ86TC9 1320 aa17.77■□□□□ 0.44
SNHG17-201ENST00000413755 GRK4P32298 578 aa17.77■□□□□ 0.44
SNHG17-201ENST00000413755 BTDP43251 543 aa17.77■□□□□ 0.44
SNHG17-201ENST00000413755 MTX1Q13505 466 aa17.77■□□□□ 0.44
SNHG17-201ENST00000413755 DZIP1Q86YF9 867 aaKnown RBP17.77■□□□□ 0.44
SNHG17-201ENST00000413755 RAET1EQ8TD07 263 aa17.77■□□□□ 0.44
SNHG17-201ENST00000413755 COLQQ9Y215 455 aaPredicted RBP17.77■□□□□ 0.44
SNHG17-201ENST00000413755 GPR75-ASB3A0A0A6YYF3 556 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 SRGAP3O43295 1099 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNHG17-201ENST00000413755 RHBDL3P58872 404 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 PRKCZQ05513 592 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 PICALMQ13492 652 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 FASTKD5Q7L8L6 764 aaKnown RBP17.76■□□□□ 0.43
SNHG17-201ENST00000413755 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
SNHG17-201ENST00000413755 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
SNHG17-201ENST00000413755 MROH7-TTC4A0A0A0MT08 1334 aa17.75■□□□□ 0.43
SNHG17-201ENST00000413755 CTNND1O60716 968 aaKnown RBP17.75■□□□□ 0.43
SNHG17-201ENST00000413755 MECOMQ03112 1051 aa17.75■□□□□ 0.43
SNHG17-201ENST00000413755 SPTY2D1Q68D10 685 aaPredicted RBP17.75■□□□□ 0.43
SNHG17-201ENST00000413755 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
SNHG17-201ENST00000413755 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.75■□□□□ 0.43
SNHG17-201ENST00000413755 GABRQQ9UN88 632 aa17.75■□□□□ 0.43
SNHG17-201ENST00000413755 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
SNHG17-201ENST00000413755 MYH13Q9UKX3 1938 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 H0YGN5 161 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 GNAI3P08754 354 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 GJA8P48165 433 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 FCGRTP55899 365 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
SNHG17-201ENST00000413755 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 CCDC84Q86UT8 332 aaPredicted RBP17.74■□□□□ 0.43
SNHG17-201ENST00000413755 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 SLC45A1Q9Y2W3 748 aa17.74■□□□□ 0.43
SNHG17-201ENST00000413755 TBC1D12O60347 775 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 GJB1P08034 283 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 CCL5P13501 91 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 PI16Q6UXB8 463 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 GADL1Q6ZQY3 521 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 UBE2Q1Q7Z7E8 422 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 NKX2-3Q8TAU0 364 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 NEUROD6Q96NK8 337 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 TNNQ9UQP3 1299 aa17.73■□□□□ 0.43
SNHG17-201ENST00000413755 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
SNHG17-201ENST00000413755 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
SNHG17-201ENST00000413755 TBC1D9Q6ZT07 1266 aa17.72■□□□□ 0.43
SNHG17-201ENST00000413755 NSUN4Q96CB9 384 aaKnown RBP17.72■□□□□ 0.43
SNHG17-201ENST00000413755 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
SNHG17-201ENST00000413755 UBXN2AP68543 259 aa17.71■□□□□ 0.43
SNHG17-201ENST00000413755 SPATA5Q8NB90 893 aa17.71■□□□□ 0.43
SNHG17-201ENST00000413755 SLAIN1Q8ND83 568 aa17.71■□□□□ 0.43
SNHG17-201ENST00000413755 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 FAM196BA6NMK8 535 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 TRIM27P14373 513 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
SNHG17-201ENST00000413755 FLT3LGP49771 235 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 TREML2Q5T2D2 321 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■□□□□ 8.5
SNHG17-201ENST00000413755 BIN2Q9UBW5 565 aaPredicted RBP17.7■□□□□ 0.42
SNHG17-201ENST00000413755 AGTPBP1Q9UPW5 1226 aa17.7■□□□□ 0.42
SNHG17-201ENST00000413755 ADCY3O60266 1144 aa17.69■□□□□ 0.42
SNHG17-201ENST00000413755 LDHCP07864 332 aa17.69■□□□□ 0.42
SNHG17-201ENST00000413755 MCAMP43121 646 aa17.69■□□□□ 0.42
SNHG17-201ENST00000413755 RRP1BQ14684 758 aaKnown RBP17.69■□□□□ 0.42
SNHG17-201ENST00000413755 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
SNHG17-201ENST00000413755 DPF3Q92784 378 aa17.69■□□□□ 0.42
SNHG17-201ENST00000413755 OSBPL5Q9H0X9 879 aaPredicted RBP17.69■□□□□ 0.42
SNHG17-201ENST00000413755 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 BCAR3O75815 825 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 MAP4K4O95819 1239 aaPredicted RBP17.68■□□□□ 0.42
SNHG17-201ENST00000413755 GNAI2P04899 355 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 GSTO1P78417 241 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 IRF5Q13568 498 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 ANKRD13CQ8N6S4 541 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 PXYLP1Q8TE99 480 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
SNHG17-201ENST00000413755 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
SNHG17-201ENST00000413755 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
SNHG17-201ENST00000413755 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
SNHG17-201ENST00000413755 SGPL1O95470 568 aa17.67■□□□□ 0.42
SNHG17-201ENST00000413755 ELNP15502 786 aa17.67■□□□□ 0.42
SNHG17-201ENST00000413755 SPP2Q13103 211 aa17.67■□□□□ 0.42
SNHG17-201ENST00000413755 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms