RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 KCNQ5Q9NR82 932 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 ARPP21Q9UBL0 812 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-207ENST00000413509 MYH1P12882 1939 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 SH2B2O14492 632 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 TRDNQ13061 729 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 MAPK8IP2Q13387 824 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 C12orf60Q5U649 245 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 NOL8Q76FK4 1167 aaKnown RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 RALYLQ86SE5 291 aaKnown RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 SGMS1Q86VZ5 419 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 IGDCC4Q8TDY8 1250 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 BRF1Q92994 677 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 TMEM87BQ96K49 555 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 GMLQ99445 158 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 ZNF219Q9P2Y4 722 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 ZDHHC9Q9Y397 364 aa9.74□□□□□ -0.85
HDAC9-207ENST00000413509 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-207ENST00000413509 B4E1Z4 1266 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 USP17L12C9JPN9 530 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 USP17L21D6R901 530 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 NFKBIEO00221 500 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 NPM3O75607 178 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 VIL1P09327 827 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 LIFRP42702 1097 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 NUCB2P80303 420 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 APOBEC3HQ6NTF7 200 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 NOL10Q9BSC4 688 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 MXD3Q9BW11 206 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 LRRC2Q9BYS8 371 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 LY9Q9HBG7 655 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 INCENPQ9NQS7 918 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 ZSWIM5Q9P217 1185 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
HDAC9-207ENST00000413509 HPS5Q9UPZ3 1129 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 FLT1P17948 1338 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 MYO3BQ8WXR4 1341 aa9.73□□□□□ -0.85
HDAC9-207ENST00000413509 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-207ENST00000413509 CYP2D7A0A087X1C5 515 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 G3V3G9 751 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 WDHD1O75717 1129 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-207ENST00000413509 BRD1O95696 1058 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 CYP2D6P10635 497 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 IARSP41252 1262 aaKnown RBP9.72□□□□□ -0.85
HDAC9-207ENST00000413509 RCAN1P53805 252 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 APOBRQ0VD83 1088 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 SEC23AQ15436 765 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 CHST3Q7LGC8 479 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 CCDC83Q8IWF9 413 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 TEX11Q8IYF3 940 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 NECAB1Q8N987 351 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 SMARCC2Q8TAQ2 1214 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 TEKT1Q969V4 418 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 ZNF277Q9NRM2 450 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-207ENST00000413509 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
HDAC9-207ENST00000413509 MINDY4BA8MYZ0 360 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 KDM4AO75164 1064 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 CTDNEP1O95476 244 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
HDAC9-207ENST00000413509 USP5P45974 858 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 CRKP46108 304 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 EVX2Q03828 476 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 SCRN1Q12765 414 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 PKP1Q13835 747 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 NFKBIBQ15653 356 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 CDC42EP5Q6NZY7 148 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 RSBN1LQ6PCB5 846 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-207ENST00000413509 LARGE2Q8N3Y3 721 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 TGFBRAP1Q8WUH2 860 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 ESR2Q92731 530 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 TNPO1Q92973 898 aaKnown RBP9.71□□□□□ -0.86
HDAC9-207ENST00000413509 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 TAOK3Q9H2K8 898 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 SPON1Q9HCB6 807 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 MCM9Q9NXL9 1143 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 TAOK2Q9UL54 1235 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 ZNRF3Q9ULT6 936 aa9.71□□□□□ -0.86
HDAC9-207ENST00000413509 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
HDAC9-207ENST00000413509 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-207ENST00000413509 KLF18A0A0U1RQI7 1052 aa9.7□□□□□ -0.86
HDAC9-207ENST00000413509 SLC3A2P08195 630 aaKnown RBP9.7□□□□□ -0.86
HDAC9-207ENST00000413509 MMP14P50281 582 aa9.7□□□□□ -0.86
HDAC9-207ENST00000413509 SCNN1DP51172 638 aa9.7□□□□□ -0.86
HDAC9-207ENST00000413509 FGD1P98174 961 aa9.7□□□□□ -0.86
HDAC9-207ENST00000413509 APOA5Q6Q788 366 aa9.7□□□□□ -0.86
HDAC9-207ENST00000413509 C16orf86Q6ZW13 317 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms