RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 EGFRP00533 1210 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 EPS15P42566 896 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 NECTIN1Q15223 517 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 KIF4BQ2VIQ3 1234 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 IFNL3Q8IZI9 196 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 USP40Q9NVE5 1235 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 FLT1P17948 1338 aa13.87□□□□□ -0.19
HDAC9-206ENST00000413380 ATRNL1Q5VV63 1379 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 POTECB2RU33 542 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 FGAP02671 866 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-206ENST00000413380 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC9-206ENST00000413380 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 TRPM4Q8TD43 1214 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 NACAP1Q9BZK3 213 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 HACL1Q9UJ83 578 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 RBM8AQ9Y5S9 174 aaKnown RBP13.86□□□□□ -0.19
HDAC9-206ENST00000413380 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
HDAC9-206ENST00000413380 ROBO3Q96MS0 1386 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 MYO1BO43795 1136 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 ENTPD3O75355 529 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 HSPA4P34932 840 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 RBM25P49756 843 aaKnown RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 TSGA10IPQ3SY00 556 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 FAM83AQ86UY5 434 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 TGFBRAP1Q8WUH2 860 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
HDAC9-206ENST00000413380 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
HDAC9-206ENST00000413380 HIRAP54198 1017 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-206ENST00000413380 ANAPC15P60006 121 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 NFIAQ12857 509 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-206ENST00000413380 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
HDAC9-206ENST00000413380 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
HDAC9-206ENST00000413380 NAPBQ9H115 298 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 UPF2Q9HAU5 1272 aaKnown RBP13.84□□□□□ -0.19
HDAC9-206ENST00000413380 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 PGAP2Q9UHJ9 254 aa13.84□□□□□ -0.19
HDAC9-206ENST00000413380 CNTNAP1P78357 1384 aa13.83□□□□□ -0.19
HDAC9-206ENST00000413380 EPHX2P34913 555 aa13.83□□□□□ -0.2
HDAC9-206ENST00000413380 USP5P45974 858 aa13.83□□□□□ -0.2
HDAC9-206ENST00000413380 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
HDAC9-206ENST00000413380 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
HDAC9-206ENST00000413380 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
HDAC9-206ENST00000413380 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
HDAC9-206ENST00000413380 GREB1LQ9C091 1923 aaPredicted RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 SLC27A2O14975 620 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 CYP21A2P08686 494 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 FGRP09769 529 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 PRKAR2AP13861 404 aaKnown RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 TDO2P48775 406 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 TNFAIP1Q13829 316 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 FAM151AQ8WW52 585 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
HDAC9-206ENST00000413380 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
HDAC9-206ENST00000413380 CLRN2A0PK11 232 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 USP17L12C9JPN9 530 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 USP17L21D6R901 530 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 APPP05067 770 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 PCP11498 1178 aaKnown RBP13.81□□□□□ -0.2
HDAC9-206ENST00000413380 MCCP23508 829 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 NT5C2P49902 561 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
HDAC9-206ENST00000413380 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
HDAC9-206ENST00000413380 NBPF3Q9H094 633 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 EHD4Q9H223 541 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 MCM9Q9NXL9 1143 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 PPP2R3BQ9Y5P8 575 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 PAPPA2Q9BXP8 1791 aa13.81□□□□□ -0.2
HDAC9-206ENST00000413380 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-206ENST00000413380 CACNB3P54284 484 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 GABPAQ06546 454 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 PPARAQ07869 468 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
HDAC9-206ENST00000413380 SH3BP5LQ7L8J4 393 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
HDAC9-206ENST00000413380 ASTN2O75129 1339 aaPredicted RBP13.8□□□□□ -0.2
HDAC9-206ENST00000413380 ZNF213O14771 459 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms