RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 CHMP4BQ9H444 224 aaKnown RBP12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 AATFQ9NY61 560 aaKnown RBP eCLIP12.45□□□□□ -0.42
NCKIPSD-202ENST00000413374 FAM196BA6NMK8 535 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 IRF6O14896 467 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 SMARCA5O60264 1052 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 ADGRA1Q86SQ6 560 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 NOL10Q9BSC4 688 aaKnown RBP12.44□□□□□ -0.42
NCKIPSD-202ENST00000413374 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 FKTNO75072 461 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 CYP7A1P22680 504 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 GTF2A2P52657 109 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 DYNLL1P63167 89 aaKnown RBP12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 ERO1BQ86YB8 467 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 TGFBRAP1Q8WUH2 860 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
NCKIPSD-202ENST00000413374 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 BAG3O95817 575 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 CRHR2Q13324 411 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 MAGEB6Q8N7X4 407 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 MIGA1Q8NAN2 632 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 RPAP1Q9BWH6 1393 aaPredicted RBP12.42□□□□□ -0.42
NCKIPSD-202ENST00000413374 PHF20L1A8MW92 1017 aa12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 PPATQ06203 517 aa12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 SNAPC2Q13487 334 aa12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 SLC4A8Q2Y0W8 1093 aa12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 EDC3Q96F86 508 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 SAP30BPQ9UHR5 308 aaKnown RBP12.41□□□□□ -0.42
NCKIPSD-202ENST00000413374 BTBD19C9JJ37 291 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 GOLIM4O00461 696 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 CETPP11597 493 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 PPP4CP60510 307 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 PPIL2Q13356 520 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 TAF1CQ15572 869 aaPredicted RBP12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 PICK1Q9NRD5 415 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 ZHX2Q9Y6X8 837 aa12.4□□□□□ -0.42
NCKIPSD-202ENST00000413374 PTPRAP18433 802 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 NOL9Q5SY16 702 aaKnown RBP12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 CD99L2Q8TCZ2 262 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 CFHR5Q9BXR6 569 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 LRRCC1Q9C099 1032 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 CASP8AP2Q9UKL3 1982 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 RFX7Q2KHR2 1363 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 ATRNL1Q5VV63 1379 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
NCKIPSD-202ENST00000413374 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 PLCG2P16885 1265 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 USP5P45974 858 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 SLC9C2Q5TAH2 1124 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 TRIM17Q9Y577 477 aa12.38□□□□□ -0.43
NCKIPSD-202ENST00000413374 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 PDHXO00330 501 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 TBC1D12O60347 775 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 CTNND1O60716 968 aaKnown RBP12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 SP3Q02447 781 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 FLT1P17948 1338 aa12.37□□□□□ -0.43
NCKIPSD-202ENST00000413374 CHGBP05060 677 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 CAP1Q01518 475 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 MOGSQ13724 837 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 NOM1Q5C9Z4 860 aaKnown RBP12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 TSHZ3Q63HK5 1081 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 CRACR2BQ8N4Y2 399 aaPredicted RBP12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 TRIM34Q9BYJ4 488 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms