RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SEMA3EO15041 775 aa15.1■□□□□ 0.01
LITAF-203ENST00000413364 PRKAB2O43741 272 aa15.1■□□□□ 0.01
LITAF-203ENST00000413364 FOSBP53539 338 aa15.1■□□□□ 0.01
LITAF-203ENST00000413364 NOLC1Q14978 699 aaKnown RBP eCLIP15.1■□□□□ 0.011e-6■□□□□ 11
LITAF-203ENST00000413364 MYCBPQ99417 103 aaPredicted RBP15.1■□□□□ 0.01
LITAF-203ENST00000413364 CNNM2Q9H8M5 875 aa15.1■□□□□ 0.01
LITAF-203ENST00000413364 CFAP45Q9UL16 551 aa15.1■□□□□ 0.01
LITAF-203ENST00000413364 TM4SF1P30408 202 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 FAM196AQ6ZSG2 479 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 RAI14Q9P0K7 980 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 CTIFO43310 598 aaKnown RBP15.09■□□□□ 0.01
LITAF-203ENST00000413364 ADRA2BP18089 450 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
LITAF-203ENST00000413364 TDO2P48775 406 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 AKNAD1Q5T1N1 836 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 ATL3Q6DD88 541 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 CCDC24Q8N4L8 307 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 IGDCC4Q8TDY8 1250 aa15.09■□□□□ 0.01
LITAF-203ENST00000413364 MORC2Q9Y6X9 1032 aaPredicted RBP15.09■□□□□ 0.01
LITAF-203ENST00000413364 PDS5AQ29RF7 1337 aaKnown RBP15.08■□□□□ 0.01
LITAF-203ENST00000413364 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
LITAF-203ENST00000413364 CPLX1O14810 134 aa15.08■□□□□ 0
LITAF-203ENST00000413364 PPFIA3O75145 1194 aa15.08■□□□□ 0
LITAF-203ENST00000413364 KRT23Q9C075 422 aa15.08■□□□□ 0
LITAF-203ENST00000413364 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0
LITAF-203ENST00000413364 DDX41Q9UJV9 622 aaKnown RBP15.08■□□□□ 0
LITAF-203ENST00000413364 MAGEB6P1A0A0J9YX57 407 aa15.08■□□□□ 0
LITAF-203ENST00000413364 NFIXQ14938 502 aa15.08■□□□□ 0
LITAF-203ENST00000413364 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
LITAF-203ENST00000413364 ADGRA1Q86SQ6 560 aa15.08■□□□□ 0
LITAF-203ENST00000413364 RNF214Q8ND24 703 aa15.08■□□□□ 0
LITAF-203ENST00000413364 STAG1Q8WVM7 1258 aa15.08■□□□□ 0
LITAF-203ENST00000413364 LRRC4BQ9NT99 713 aa15.08■□□□□ 0
LITAF-203ENST00000413364 TACC3Q9Y6A5 838 aa15.08■□□□□ 0
LITAF-203ENST00000413364 LIG1P18858 919 aa15.07■□□□□ 0
LITAF-203ENST00000413364 KLRK1P26718 216 aa15.07■□□□□ 0
LITAF-203ENST00000413364 APOA5Q6Q788 366 aa15.07■□□□□ 0
LITAF-203ENST00000413364 MFSD6Q6ZSS7 791 aa15.07■□□□□ 0
LITAF-203ENST00000413364 SGMS1Q86VZ5 419 aa15.07■□□□□ 0
LITAF-203ENST00000413364 RAB11FIP4Q86YS3 637 aa15.07■□□□□ 0
LITAF-203ENST00000413364 ZNF396Q96N95 335 aaPredicted RBP15.07■□□□□ 0
LITAF-203ENST00000413364 LY9Q9HBG7 655 aa15.07■□□□□ 0
LITAF-203ENST00000413364 INCENPQ9NQS7 918 aa15.07■□□□□ 0
LITAF-203ENST00000413364 SPTLC3Q9NUV7 552 aa15.07■□□□□ 0
LITAF-203ENST00000413364 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.07■□□□□ 0
LITAF-203ENST00000413364 NPHP1O15259 732 aa15.06■□□□□ 0
LITAF-203ENST00000413364 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 0
LITAF-203ENST00000413364 GUCY1B3Q02153 619 aa15.06■□□□□ 0
LITAF-203ENST00000413364 TMEM67Q5HYA8 995 aa15.06■□□□□ 0
LITAF-203ENST00000413364 PGBD1Q96JS3 809 aa15.06■□□□□ 0
LITAF-203ENST00000413364 C8orf76Q96K31 380 aa15.06■□□□□ 0
LITAF-203ENST00000413364 NCAPGQ9BPX3 1015 aa15.06■□□□□ 0
LITAF-203ENST00000413364 FUCA2Q9BTY2 467 aa15.06■□□□□ 0
LITAF-203ENST00000413364 BRMS1Q9HCU9 246 aa15.06■□□□□ 0
LITAF-203ENST00000413364 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
LITAF-203ENST00000413364 TNRC6CQ9HCJ0 1690 aaKnown RBP15.06■□□□□ 0
LITAF-203ENST00000413364 CACNA1SQ13698 1873 aa15.06■□□□□ 0
LITAF-203ENST00000413364 KDM4AO75164 1064 aa15.06■□□□□ 0
LITAF-203ENST00000413364 HIBADHP31937 336 aaKnown RBP15.06■□□□□ 0
LITAF-203ENST00000413364 LIFRP42702 1097 aa15.06■□□□□ 0
LITAF-203ENST00000413364 GTF2A1P52655 376 aaPredicted RBP15.06■□□□□ 0
LITAF-203ENST00000413364 GIMAP6Q6P9H5 292 aa15.06■□□□□ 0
LITAF-203ENST00000413364 RIOK1Q9BRS2 568 aaKnown RBP15.06■□□□□ 0
LITAF-203ENST00000413364 RCOR1Q9UKL0 485 aa15.06■□□□□ 0
LITAF-203ENST00000413364 MYH15Q9Y2K3 1946 aa15.06■□□□□ 0
LITAF-203ENST00000413364 LOC102724159A0A0B4J2E5 919 aa15.05■□□□□ 0
LITAF-203ENST00000413364 CDKL5O76039 1030 aa15.05■□□□□ 0
LITAF-203ENST00000413364 PWP2Q15269 919 aaKnown RBP15.05■□□□□ 0
LITAF-203ENST00000413364 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ 0
LITAF-203ENST00000413364 FBXO18Q8NFZ0 1043 aa15.05■□□□□ 0
LITAF-203ENST00000413364 RNF41Q9H4P4 317 aaPredicted RBP15.05■□□□□ 0
LITAF-203ENST00000413364 SENP2Q9HC62 589 aa15.05■□□□□ 0
LITAF-203ENST00000413364 DDX19AQ9NUU7 478 aaKnown RBP15.05■□□□□ 0
LITAF-203ENST00000413364 CHD4Q14839 1912 aa15.05■□□□□ 0
LITAF-203ENST00000413364 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
LITAF-203ENST00000413364 ZBTB43O43298 467 aa15.05■□□□□ -0
LITAF-203ENST00000413364 UVSSAQ2YD98 709 aa15.05■□□□□ -0
LITAF-203ENST00000413364 NFXL1Q6ZNB6 911 aa15.05■□□□□ -0
LITAF-203ENST00000413364 KRT222Q8N1A0 295 aa15.05■□□□□ -0
LITAF-203ENST00000413364 CNBD1Q8NA66 436 aa15.05■□□□□ -0
LITAF-203ENST00000413364 MTA3Q9BTC8 594 aa15.05■□□□□ -0
LITAF-203ENST00000413364 NUP62CLQ9H1M0 184 aa15.05■□□□□ -0
LITAF-203ENST00000413364 QTRT2Q9H974 415 aaKnown RBP15.05■□□□□ -0
LITAF-203ENST00000413364 ANAPC4Q9UJX5 808 aa15.05■□□□□ -0
LITAF-203ENST00000413364 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.04■□□□□ -0
LITAF-203ENST00000413364 PPARAQ07869 468 aa15.04■□□□□ -0
LITAF-203ENST00000413364 CPLX2Q6PUV4 134 aaKnown RBP15.04■□□□□ -0
LITAF-203ENST00000413364 BANK1Q8NDB2 785 aa15.04■□□□□ -0
LITAF-203ENST00000413364 ZNF384Q8TF68 577 aa15.04■□□□□ -0
LITAF-203ENST00000413364 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
LITAF-203ENST00000413364 IRS2Q9Y4H2 1338 aa15.04■□□□□ -0
LITAF-203ENST00000413364 GRAPQ13588 217 aa15.04■□□□□ -0
LITAF-203ENST00000413364 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
LITAF-203ENST00000413364 BICD2Q8TD16 824 aa15.04■□□□□ -0
LITAF-203ENST00000413364 SDR42E1Q8WUS8 393 aa15.04■□□□□ -0
LITAF-203ENST00000413364 USP28Q96RU2 1077 aa15.04■□□□□ -0
LITAF-203ENST00000413364 DACT1Q9NYF0 836 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms