RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 GGA3Q9NZ52 723 aa17.98■□□□□ 0.47
PUDP-202ENST00000412827 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
PUDP-202ENST00000412827 NBPF9Q3BBW0 867 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 ECM29Q5VYK3 1845 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 CCDC129Q6ZRS4 1044 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 SULF1Q8IWU6 871 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 RASEFQ8IZ41 740 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 ADAMTSL1Q8N6G6 1762 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 MIGA1Q8NAN2 632 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 PRMT6Q96LA8 375 aaPredicted RBP17.97■□□□□ 0.47
PUDP-202ENST00000412827 USP40Q9NVE5 1235 aa17.97■□□□□ 0.47
PUDP-202ENST00000412827 MBD4O95243 580 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 EGFRP00533 1210 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 VPS53Q5VIR6 699 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
PUDP-202ENST00000412827 ADGRA1Q86SQ6 560 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
PUDP-202ENST00000412827 TDRD3Q9H7E2 651 aaKnown RBP17.96■□□□□ 0.47
PUDP-202ENST00000412827 ZNF70Q9UC06 446 aaPredicted RBP17.96■□□□□ 0.47
PUDP-202ENST00000412827 PPP2R3BQ9Y5P8 575 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 CYP46A1Q9Y6A2 500 aa17.96■□□□□ 0.47
PUDP-202ENST00000412827 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
PUDP-202ENST00000412827 HIRAP54198 1017 aaPredicted RBP17.95■□□□□ 0.46
PUDP-202ENST00000412827 CDC42EP5Q6NZY7 148 aa17.95■□□□□ 0.46
PUDP-202ENST00000412827 PATL2C9JE40 543 aaKnown RBP17.94■□□□□ 0.46
PUDP-202ENST00000412827 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
PUDP-202ENST00000412827 CHGBP05060 677 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
PUDP-202ENST00000412827 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 FAM83AQ86UY5 434 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 RIOK1Q9BRS2 568 aaKnown RBP17.94■□□□□ 0.46
PUDP-202ENST00000412827 NACAP1Q9BZK3 213 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 PGAP2Q9UHJ9 254 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 PCDHAC2Q9Y5I4 1007 aa17.94■□□□□ 0.46
PUDP-202ENST00000412827 ENTPD3O75355 529 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 USP5P45974 858 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 RHBDL3P58872 404 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 ANKRD1Q15327 319 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 CHADLQ6NUI6 762 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 GIMAP6Q6P9H5 292 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 AMOTL1Q8IY63 956 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 JAKMIP1Q96N16 626 aaKnown RBP17.93■□□□□ 0.46
PUDP-202ENST00000412827 TTC14Q96N46 770 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 IDI2Q9BXS1 227 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 LAMA4Q16363 1823 aa17.93■□□□□ 0.46
PUDP-202ENST00000412827 KIF3CO14782 793 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 CYP21A2P08686 494 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
PUDP-202ENST00000412827 SLFNL1Q499Z3 407 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 BLOC1S2Q6QNY1 142 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 CDC37L1Q7L3B6 337 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 KRT26Q7Z3Y9 468 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 LCORLQ8N3X6 602 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 SMC1BQ8NDV3 1235 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
PUDP-202ENST00000412827 HOOK2Q96ED9 719 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 NEK1Q96PY6 1258 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
PUDP-202ENST00000412827 COL2A1P02458 1487 aaPredicted RBP17.92■□□□□ 0.46
PUDP-202ENST00000412827 TOMM70O94826 608 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 FGAP02671 866 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 DYNLL1P63167 89 aaKnown RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 ZSCAN31Q96LW9 406 aaPredicted RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 ATP8A2Q9NTI2 1148 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 FLT1P17948 1338 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 TCP10L2B9ZVM9 353 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 ZNF213O14771 459 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 FOXP2O15409 715 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 WDHD1O75717 1129 aaPredicted RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 CD2BP2O95400 341 aaKnown RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 RPS6KB1P23443 525 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 SLC4A3P48751 1232 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 PICALMQ13492 652 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 INTS4Q96HW7 963 aaKnown RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 PDRG1Q9NUG6 133 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
PUDP-202ENST00000412827 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
PUDP-202ENST00000412827 ASTN2O75129 1339 aaPredicted RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 WDR19Q8NEZ3 1342 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 HSP90AA1P07900 732 aaKnown RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 NF2P35240 595 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 CACNB3P54284 484 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 ADCK5Q3MIX3 580 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 FAM151AQ8WW52 585 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 DEFB129Q9H1M3 183 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 DHX36Q9H2U1 1008 aaKnown RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 SH2B1Q9NRF2 756 aaPredicted RBP17.9■□□□□ 0.46
PUDP-202ENST00000412827 LIMCH1Q9UPQ0 1083 aa17.9■□□□□ 0.46
PUDP-202ENST00000412827 APPP05067 770 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 HLA-DOAP06340 250 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 NT5C2P49902 561 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 NFIAQ12857 509 aa17.89■□□□□ 0.45
PUDP-202ENST00000412827 CUL4AQ13619 759 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms