RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 RRP12Q5JTH9 1297 aaKnown RBP21.33■■□□□ 1.01
CXXC1-202ENST00000412036 STRIP1Q5VSL9 837 aa21.33■■□□□ 1.01
CXXC1-202ENST00000412036 NCOA5Q9HCD5 579 aaKnown RBP21.33■■□□□ 1.01
CXXC1-202ENST00000412036 ANAPC4Q9UJX5 808 aa21.33■■□□□ 1.01
CXXC1-202ENST00000412036 MCM5P33992 734 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 GSTO1P78417 241 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 RAB3GAP1Q15042 981 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 DDX4Q9NQI0 724 aaKnown RBP21.32■■□□□ 1
CXXC1-202ENST00000412036 SAP30BPQ9UHR5 308 aaKnown RBP21.32■■□□□ 1
CXXC1-202ENST00000412036 JAK2O60674 1132 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 PLCD1P51178 756 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 APOBEC3HQ6NTF7 200 aaKnown RBP21.32■■□□□ 1
CXXC1-202ENST00000412036 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 TNPO1Q92973 898 aaKnown RBP21.32■■□□□ 1
CXXC1-202ENST00000412036 DYNLL2Q96FJ2 89 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 CD2APQ9Y5K6 639 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 NAV1Q8NEY1 1877 aa21.32■■□□□ 1
CXXC1-202ENST00000412036 USP17L3A6NCW0 530 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 USP17L4A6NCW7 530 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 RAD17O75943 681 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 SLURP2P0DP57 97 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 FOXD4L5Q5VV16 416 aaPredicted RBP21.31■■□□□ 1
CXXC1-202ENST00000412036 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 RALYLQ86SE5 291 aaKnown RBP21.31■■□□□ 1
CXXC1-202ENST00000412036 FOXD4L4Q8WXT5 416 aaPredicted RBP21.31■■□□□ 1
CXXC1-202ENST00000412036 ATP8A2Q9NTI2 1148 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 HPS5Q9UPZ3 1129 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 CTDNEP1O95476 244 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 PDIA3P30101 505 aaKnown RBP21.31■■□□□ 1
CXXC1-202ENST00000412036 CCT2P78371 535 aaKnown RBP21.31■■□□□ 1
CXXC1-202ENST00000412036 GIMAP6Q6P9H5 292 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 MFSD6Q6ZSS7 791 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 GTF3C6Q969F1 213 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 BCS1LQ9Y276 419 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 PSME4Q14997 1843 aa21.31■■□□□ 1
CXXC1-202ENST00000412036 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
CXXC1-202ENST00000412036 ANKRD1Q15327 319 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 FBXL16Q8N461 479 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 SLC44A5Q8NCS7 719 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 ZSCAN31Q96LW9 406 aaPredicted RBP21.3■■□□□ 1
CXXC1-202ENST00000412036 SH2B1Q9NRF2 756 aaPredicted RBP21.3■■□□□ 1
CXXC1-202ENST00000412036 FOCADQ5VW36 1801 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 USP5P45974 858 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 LARGE2Q8N3Y3 721 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
CXXC1-202ENST00000412036 FLT1P17948 1338 aa21.3■■□□□ 1
CXXC1-202ENST00000412036 WDHD1O75717 1129 aaPredicted RBP21.29■■□□□ 1
CXXC1-202ENST00000412036 LDHCP07864 332 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 FGRP09769 529 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 RXRAP19793 462 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 CACNB3P54284 484 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 RASSF7Q02833 373 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 TEX11Q8IYF3 940 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 LY9Q9HBG7 655 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 CIZ1Q9ULV3 898 aaPredicted RBP21.29■■□□□ 1
CXXC1-202ENST00000412036 ZBTB12Q9Y330 459 aaPredicted RBP21.29■■□□□ 1
CXXC1-202ENST00000412036 PSMD14O00487 310 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 BAG3O95817 575 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 CRKP46108 304 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 EVCP57679 992 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 FGD1P98174 961 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 NFIAQ12857 509 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 C12orf60Q5U649 245 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 TMED8Q6PL24 325 aaPredicted RBP21.29■■□□□ 1
CXXC1-202ENST00000412036 SUPT20HQ8NEM7 779 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 TOMM22Q9NS69 142 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
CXXC1-202ENST00000412036 NMT2O60551 498 aa21.28■■□□□ 1
CXXC1-202ENST00000412036 PFKFB2O60825 505 aa21.28■■□□□ 1
CXXC1-202ENST00000412036 GJB2P29033 226 aa21.28■■□□□ 1
CXXC1-202ENST00000412036 CDC42EP5Q6NZY7 148 aa21.28■■□□□ 1
CXXC1-202ENST00000412036 MYL10Q9BUA6 226 aa21.28■■□□□ 1
CXXC1-202ENST00000412036 TRDNQ13061 729 aa21.27■■□□□ 1
CXXC1-202ENST00000412036 SBK1Q52WX2 424 aa21.27■■□□□ 1
CXXC1-202ENST00000412036 ZFPM1Q8IX07 1006 aa21.27■■□□□ 1
CXXC1-202ENST00000412036 IL27Q8NEV9 243 aa21.27■■□□□ 1
CXXC1-202ENST00000412036 CWC22Q9HCG8 908 aaKnown RBP21.27■■□□□ 1
CXXC1-202ENST00000412036 DEKP35659 375 aaKnown RBP21.27■■□□□ 1
CXXC1-202ENST00000412036 KLF18A0A0U1RQI7 1052 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
CXXC1-202ENST00000412036 FAM47AQ5JRC9 791 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-202ENST00000412036 MYH1P12882 1939 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 IGSF3O75054 1194 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 PICALMQ13492 652 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 GMLQ99445 158 aa21.26■□□□□ 0.99
CXXC1-202ENST00000412036 ARPP21Q9UBL0 812 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-202ENST00000412036 ANGEL1Q9UNK9 670 aaKnown RBP21.26■□□□□ 0.99
CXXC1-202ENST00000412036 WDR19Q8NEZ3 1342 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 HHIPL2Q6UWX4 724 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 USP40Q9NVE5 1235 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 ECM29Q5VYK3 1845 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 TEKT1Q969V4 418 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
CXXC1-202ENST00000412036 TAOK3Q9H2K8 898 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 SMC3Q9UQE7 1217 aa21.25■□□□□ 0.99
CXXC1-202ENST00000412036 SYT1P21579 422 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms