RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 IFI16Q16666 785 aaKnown RBP3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 PRR23BQ6ZRT6 265 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 ZSWIM9Q86XI8 627 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 KCNB2Q92953 911 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 ISL2Q96A47 359 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 CCDC97Q96F63 343 aaPredicted RBP3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 MISP3Q96FF7 219 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 VAV3Q9UKW4 847 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 PCDHGC5Q9Y5F6 944 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 CSADQ9Y600 493 aa3.43□□□□□ -1.86
RNU4-43P-201ENST00000410628 GADD45BO75293 160 aaPredicted RBP3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 ITPKAP23677 461 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 ZP2Q05996 745 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 IKZF1Q13422 519 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 KCNMB1Q16558 191 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 HP1BP3Q5SSJ5 553 aaPredicted RBP3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 ANGEL2Q5VTE6 544 aaKnown RBP3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 KIAA0319Q5VV43 1072 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 PI16Q6UXB8 463 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 C1QL4Q86Z23 238 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 FAM84AQ96KN4 292 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 ATXN3LQ9H3M9 355 aa3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 SSU72Q9NP77 194 aaKnown RBP3.42□□□□□ -1.86
RNU4-43P-201ENST00000410628 TMEM238LA0A1B0GVL6 79 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 H3BRB1 525 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 GSTP1P09211 210 aaKnown RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 RAP1GAPP47736 663 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 SERPINB4P48594 390 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 AP3B2Q13367 1082 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 SYDE1Q6ZW31 735 aaPredicted RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 LRRC56Q8IYG6 542 aaPredicted RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 DDX54Q8TDD1 881 aaKnown RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 EPS8L3Q8TE67 593 aaKnown RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 TUT1Q9H6E5 874 aaKnown RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 LMCD1Q9NZU5 365 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 GPN3Q9UHW5 284 aaPredicted RBP3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 CTNND2Q9UQB3 1225 aa3.41□□□□□ -1.86
RNU4-43P-201ENST00000410628 TMEM265A0A087WTH1 108 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 SLFN14P0C7P3 912 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 C1QTNF9P0C862 333 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 FCGRTP55899 365 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 GRM2Q14416 872 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 NKPD1Q17RQ9 610 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 KIF4BQ2VIQ3 1234 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 PPM1JQ5JR12 505 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 MAP1SQ66K74 1059 aaPredicted RBP3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 SLC23A3Q6PIS1 610 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 FAM214BQ7L5A3 538 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 PDZD3Q86UT5 571 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 SPACA3Q8IXA5 215 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 FLAD1Q8NFF5 587 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 CCDC74AQ96AQ1 378 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 DIRC2Q96SL1 478 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 NIF3L1Q9GZT8 377 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 ZFYVE1Q9HBF4 777 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 PCOLCE2Q9UKZ9 415 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 BRPF3Q9ULD4 1205 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 CNTNAP4Q9C0A0 1308 aa3.4□□□□□ -1.87
RNU4-43P-201ENST00000410628 DCDC2CA8MYV0 355 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 PRR33A8MZF0 331 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 GPR182O15218 404 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 CPNE3O75131 537 aaKnown RBP3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 KRT1P04264 644 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 ZSCAN22P10073 491 aaPredicted RBP3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 SF3B2Q13435 895 aaKnown RBP3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 MPZL3Q6UWV2 235 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 GPBAR1Q8TDU6 330 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 TNKS2Q9H2K2 1166 aa3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 CARS2Q9HA77 564 aaKnown RBP3.39□□□□□ -1.87
RNU4-43P-201ENST00000410628 EIF1AYO14602 144 aaKnown RBP3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 ICMTO60725 284 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 ARHGAP4P98171 946 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 CDKAL1Q5VV42 579 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 DTHD1Q6ZMT9 781 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 C12orf40Q86WS4 652 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 SULF2Q8IWU5 870 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 CCDC82Q8N4S0 544 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 GRIN3AQ8TCU5 1115 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 TMC1Q8TDI8 760 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 TOX2Q96NM4 488 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 ATP13A1Q9HD20 1204 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 C19orf73Q9NVV2 129 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 SERPINA10Q9UK55 444 aa3.38□□□□□ -1.87
RNU4-43P-201ENST00000410628 NPIPB6E9PJ23 425 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 EIF4EBP3O60516 100 aaPredicted RBP3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 NTF4P34130 210 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 ZC3H12AQ5D1E8 599 aaKnown RBP3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 RASIP1Q5U651 963 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 PRPF40BQ6NWY9 871 aaKnown RBP3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 GLYCTKQ8IVS8 523 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 ACSBG1Q96GR2 724 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 KIRREL1Q96J84 757 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 HSPA12BQ96MM6 686 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 NSUN3Q9H649 340 aaKnown RBP3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 MKNK2Q9HBH9 465 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 CBX8Q9HC52 389 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 PRDM10Q9NQV6 1147 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 TMEM39AQ9NV64 488 aa3.37□□□□□ -1.87
RNU4-43P-201ENST00000410628 AKAP2Q9Y2D5 859 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms