RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
TTC7A-204ENST00000409825 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
TTC7A-204ENST00000409825 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
TTC7A-204ENST00000409825 OTUD7AQ8TE49 926 aaPredicted RBP17.16■□□□□ 0.34
TTC7A-204ENST00000409825 DHX36Q9H2U1 1008 aaKnown RBP17.16■□□□□ 0.34
TTC7A-204ENST00000409825 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
TTC7A-204ENST00000409825 USP17L8P0C7I0 530 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 PTPDC1A2A3K4 754 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 IREB2P48200 963 aaKnown RBP17.15■□□□□ 0.34
TTC7A-204ENST00000409825 CCNA1P78396 465 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 APBB1IPQ7Z5R6 666 aaPredicted RBP17.15■□□□□ 0.34
TTC7A-204ENST00000409825 VPS36Q86VN1 386 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 TBC1D2Q9BYX2 928 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 CDHR2Q9BYE9 1310 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 MCM4P33991 863 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 TMED8Q6PL24 325 aaPredicted RBP17.15■□□□□ 0.34
TTC7A-204ENST00000409825 SWAP70Q9UH65 585 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 ICA1Q05084 483 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
TTC7A-204ENST00000409825 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.33
TTC7A-204ENST00000409825 STAT6P42226 847 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 NDUFB9Q9Y6M9 179 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 SLC27A2O14975 620 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
TTC7A-204ENST00000409825 EXOC1Q9NV70 894 aa17.14■□□□□ 0.33
TTC7A-204ENST00000409825 GTPBP4Q9BZE4 634 aaKnown RBP17.13■□□□□ 0.33
TTC7A-204ENST00000409825 ABT1Q9ULW3 272 aaKnown RBP17.13■□□□□ 0.33
TTC7A-204ENST00000409825 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 ABCB5Q2M3G0 1257 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 FAM114A1Q8IWE2 563 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 IFNL3Q8IZI9 196 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 USP14P54578 494 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 AK2P54819 239 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 CCDC40Q4G0X9 1142 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 PAGR1Q9BTK6 254 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
TTC7A-204ENST00000409825 ZSCAN22P10073 491 aaPredicted RBP17.13■□□□□ 0.33
TTC7A-204ENST00000409825 RPS6KB1P23443 525 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
TTC7A-204ENST00000409825 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 SLIT1O75093 1534 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 RXRAP19793 462 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 CETN2P41208 172 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 SP4Q02446 784 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
TTC7A-204ENST00000409825 GPS2Q13227 327 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 SYNE4Q8N205 404 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
TTC7A-204ENST00000409825 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 LRRIQ1Q96JM4 1722 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 SYKP43405 635 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 C2orf69Q8N8R5 385 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 ADORA1P30542 326 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
TTC7A-204ENST00000409825 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
TTC7A-204ENST00000409825 NEBLO76041 1014 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 ADCY7P51828 1080 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 CAMK4Q16566 473 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 DBNLQ9UJU6 430 aaKnown RBP17.1■□□□□ 0.33
TTC7A-204ENST00000409825 CNTNAP4Q9C0A0 1308 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
TTC7A-204ENST00000409825 MTIF2P46199 727 aaKnown RBP17.1■□□□□ 0.33
TTC7A-204ENST00000409825 OSBPP22059 807 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 SERPINB13Q9UIV8 391 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 MYCLP12524 364 aaPredicted RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 GNPTABQ3T906 1256 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 KRT25Q7Z3Z0 450 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 SDR42E1Q8WUS8 393 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 AZI2Q9H6S1 392 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 EDC3Q96F86 508 aaKnown RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 CFBP00751 764 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 RILPL1Q5EBL4 403 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 MRPL11Q9Y3B7 192 aaKnown RBP17.09■□□□□ 0.33
TTC7A-204ENST00000409825 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
TTC7A-204ENST00000409825 FAM13AO94988 1023 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms