RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 PDGFDQ9GZP0 370 aaPredicted RBP23.03■■□□□ 1.28
LIMS2-207ENST00000409808 BBOX1O75936 387 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 CYP7A1P22680 504 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 PTGS1P23219 599 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 SARM1Q6SZW1 724 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 DRC7Q8IY82 874 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 LCORLQ8N3X6 602 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 CRAMP1Q96RY5 1269 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 STK32BQ9NY57 414 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 CTNNA3Q9UI47 895 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 PTPDC1A2A3K4 754 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 PRKAB2O43741 272 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 UFL1O94874 794 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 OLFM4Q6UX06 510 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 CHST3Q7LGC8 479 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 CCDC186Q7Z3E2 898 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 ZNF384Q8TF68 577 aa23.02■■□□□ 1.28
LIMS2-207ENST00000409808 IMMTQ16891 758 aaKnown RBP23.01■■□□□ 1.27
LIMS2-207ENST00000409808 SRGNP10124 158 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 SALL1Q9NSC2 1324 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 CACNA1SQ13698 1873 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 CTDNEP1O95476 244 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 STX1AQ16623 288 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 CCDC73Q6ZRK6 1079 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 CCAR1Q8IX12 1150 aaKnown RBP23■■□□□ 1.27
LIMS2-207ENST00000409808 DNAJC25Q9H1X3 360 aa23■■□□□ 1.27
LIMS2-207ENST00000409808 GOLGA6L19H0YKK7 550 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 SEMA3EO15041 775 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 EVCP57679 992 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 APOBRQ0VD83 1088 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 PKNOX2Q96KN3 472 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 CCDC94Q9BW85 323 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-207ENST00000409808 EPB41L4AQ9HCS5 686 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-207ENST00000409808 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
LIMS2-207ENST00000409808 PPEF1O14829 653 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-207ENST00000409808 NBPF3Q9H094 633 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 POLLQ9UGP5 575 aa22.99■■□□□ 1.27
LIMS2-207ENST00000409808 COL11A2P13942 1736 aaPredicted RBP22.99■■□□□ 1.27
LIMS2-207ENST00000409808 ZNF213O14771 459 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 NEMFO60524 1076 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 PRDX5P30044 214 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 GGA1Q9UJY5 639 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 PDIA3P30101 505 aaKnown RBP22.98■■□□□ 1.27
LIMS2-207ENST00000409808 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
LIMS2-207ENST00000409808 IQCB1Q15051 598 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 MRFAP1L1Q96HT8 127 aa22.98■■□□□ 1.27
LIMS2-207ENST00000409808 GSG1L2A8MUP6 293 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 PATL2C9JE40 543 aaKnown RBP22.97■■□□□ 1.27
LIMS2-207ENST00000409808 IFNL3Q8IZI9 196 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 SLC4A4Q9Y6R1 1079 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 DYNLL1P63167 89 aaKnown RBP22.97■■□□□ 1.27
LIMS2-207ENST00000409808 FAM160A1Q05DH4 1040 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 NKX2-3Q8TAU0 364 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 ZMYND15Q9H091 742 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
LIMS2-207ENST00000409808 KINO60870 393 aaKnown RBP22.96■■□□□ 1.27
LIMS2-207ENST00000409808 NPR1P16066 1061 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 ATP2B4P23634 1241 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 PDE6BP35913 854 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 BAG6P46379 1132 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 MECOMQ03112 1051 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 RGS22Q8NE09 1264 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 TBC1D16Q8TBP0 767 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 ANO10Q9NW15 660 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 TBC1D10CQ8IV04 446 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 ENGASEQ8NFI3 743 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 NSUN4Q96CB9 384 aaKnown RBP22.96■■□□□ 1.27
LIMS2-207ENST00000409808 INCENPQ9NQS7 918 aa22.96■■□□□ 1.27
LIMS2-207ENST00000409808 MAGEB6P1A0A0J9YX57 407 aa22.95■■□□□ 1.26
LIMS2-207ENST00000409808 C6orf229H3BNL8 230 aa22.95■■□□□ 1.26
LIMS2-207ENST00000409808 SNW1Q13573 536 aaKnown RBP22.95■■□□□ 1.26
LIMS2-207ENST00000409808 ZNF804AQ7Z570 1209 aa22.95■■□□□ 1.26
LIMS2-207ENST00000409808 ZNF710Q8N1W2 664 aa22.95■■□□□ 1.26
LIMS2-207ENST00000409808 USP28Q96RU2 1077 aa22.95■■□□□ 1.26
LIMS2-207ENST00000409808 GPHNQ9NQX3 736 aaPredicted RBP22.95■■□□□ 1.26
LIMS2-207ENST00000409808 SP8Q8IXZ3 490 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 SDR42E1Q8WUS8 393 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 ZNF622Q969S3 477 aaKnown RBP eCLIP22.94■■□□□ 1.26
LIMS2-207ENST00000409808 PODXL2Q9NZ53 605 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 PDS5AQ29RF7 1337 aaKnown RBP22.94■■□□□ 1.26
LIMS2-207ENST00000409808 RIOK3O14730 519 aaKnown RBP22.94■■□□□ 1.26
LIMS2-207ENST00000409808 CTIFO43310 598 aaKnown RBP22.94■■□□□ 1.26
LIMS2-207ENST00000409808 DHX16O60231 1041 aaKnown RBP22.94■■□□□ 1.26
LIMS2-207ENST00000409808 GRIK5Q16478 980 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 NAPBQ9H115 298 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 RTEL1Q9NZ71 1219 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
LIMS2-207ENST00000409808 LRRC37AA6NMS7 1700 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 CCT2P78371 535 aaKnown RBP22.93■■□□□ 1.26
LIMS2-207ENST00000409808 C15orf52Q6ZUT6 534 aaKnown RBP22.93■■□□□ 1.26
LIMS2-207ENST00000409808 RIOK1Q9BRS2 568 aaKnown RBP22.93■■□□□ 1.26
LIMS2-207ENST00000409808 A0A1W2PQ27 194 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 A0A1W2PQ64 194 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 A0A1W2PQD8 194 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 CEBPZQ03701 1054 aaKnown RBP22.93■■□□□ 1.26
LIMS2-207ENST00000409808 CTDSPL2Q05D32 466 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 SYCP1Q15431 976 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 NAT10Q9H0A0 1025 aaKnown RBP22.93■■□□□ 1.26
LIMS2-207ENST00000409808 CD209Q9NNX6 404 aa22.93■■□□□ 1.26
LIMS2-207ENST00000409808 PAXBP1Q9Y5B6 917 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms