RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 AKNAD1Q5T1N1 836 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
LIMS2-206ENST00000409754 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 TMEM87BQ96K49 555 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 KRT23Q9C075 422 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 WDR90Q96KV7 1748 aa16.57■□□□□ 0.24
LIMS2-206ENST00000409754 NEDD4P46934 1319 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 LDHBP07195 334 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 ANAPC4Q9UJX5 808 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 B4E1Z4 1266 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 ECE2O60344 883 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 GSTO1P78417 241 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 HMGN5P82970 282 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
LIMS2-206ENST00000409754 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
LIMS2-206ENST00000409754 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
LIMS2-206ENST00000409754 JAK2O60674 1132 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 YY1P25490 414 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 PPARAQ07869 468 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 KLHL40Q2TBA0 621 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 MTA3Q9BTC8 594 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 CRNKL1Q9BZJ0 848 aaKnown RBP16.55■□□□□ 0.24
LIMS2-206ENST00000409754 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
LIMS2-206ENST00000409754 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 CXCL9Q07325 125 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 EYA3Q99504 573 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
LIMS2-206ENST00000409754 VPS37CA5D8V6 355 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 POTECB2RU33 542 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 DTNBO60941 627 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 PRPF40AO75400 957 aaKnown RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 DDNO94850 711 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 ZC3H12CQ9C0D7 883 aaKnown RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 ATP8A2Q9NTI2 1148 aa16.53■□□□□ 0.24
LIMS2-206ENST00000409754 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
LIMS2-206ENST00000409754 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 DHX16O60231 1041 aaKnown RBP16.52■□□□□ 0.24
LIMS2-206ENST00000409754 LDHCP07864 332 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
LIMS2-206ENST00000409754 SGMS1Q86VZ5 419 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 IGDCC4Q8TDY8 1250 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 TBC1D22AQ8WUA7 517 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 ZSWIM5Q9P217 1185 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 HPS5Q9UPZ3 1129 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 DDX49Q9Y6V7 483 aaKnown RBP16.52■□□□□ 0.24
LIMS2-206ENST00000409754 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
LIMS2-206ENST00000409754 GLTPD2A6NH11 291 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 KDM4AO75164 1064 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 RAD17O75943 681 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 LIFRP42702 1097 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 FAM184AQ8NB25 1140 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 ZNF784Q8NCA9 323 aaPredicted RBP16.52■□□□□ 0.23
LIMS2-206ENST00000409754 JDP2Q8WYK2 163 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.23
LIMS2-206ENST00000409754 INCENPQ9NQS7 918 aa16.52■□□□□ 0.23
LIMS2-206ENST00000409754 MINDY4BA8MYZ0 360 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 PPP4CP60510 307 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 TMEM67Q5HYA8 995 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 ZNF526Q8TF50 670 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-206ENST00000409754 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 DCP1AQ9NPI6 582 aaPredicted RBP16.51■□□□□ 0.23
LIMS2-206ENST00000409754 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
LIMS2-206ENST00000409754 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 PSMD14O00487 310 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 BAG3O95817 575 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 FGRP09769 529 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
LIMS2-206ENST00000409754 GRIK5Q16478 980 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 SBK1Q52WX2 424 aa16.5■□□□□ 0.23
LIMS2-206ENST00000409754 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms